fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G65790 AtMYB68 myb domain protein 68 (.1)

>AT5G65790.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 310
HindIII A|AGCTT 346
NcoI C|CATGG 493
StyI C|C[AT][AT]GG 46, 493


Click here to view TAIR data

>AT5G65790.1 length:1125
ATGGGAAGAG CACCGTGTTG TGATAAGGCC AACGTGAAGA AAGGGCCTTG 
50
GTCTCCTGAG GAAGACGCCA AACTCAAAGA TTACATCGAG AATAGTGGCA 
100
CAGGAGGCAA CTGGATTGCT TTGCCTCAGA AAATTGGTTT AAGGAGATGT 
150
GGGAAGAGTT GCAGGCTAAG GTGGCTCAAC TATTTGAGAC CAAACATCAA 
200
ACATGGTGGC TTCTCCGAGG AAGAAGACAA CATCATTTGT AACCTCTATG 
250
TTACTATTGG TAGCAGGTGG TCTATAATTG CTGCACAATT GCCGGGAAGA 
300
ACCGACAACG ATATCAAAAA CTATTGGAAC ACGAGGCTGA AGAAGAAGCT 
350
TCTGAACAAA CAAAGGAAAG AGTTCCAAGA AGCGCGAATG AAGCAAGAGA 
400
TGGTGATGAT GAAAAGGCAA CAACAAGGAC AAGGACAAGG TCAAAGTAAT 
450
GGTAGTACGG ATCTTTATCT TAACAACATG TTTGGATCAT CACCATGGCC 
500
ATTACTACCA CAACTTCCTC CTCCACATCA TCAAATACCT CTTGGAATGA 
550
TGGAACCAAC AAGCTGTAAC TACTACCAAA CGACACCGTC TTGTAACCTA 
600
GAACAAAAGC CATTGATCAC ACTCAAGAAC ATGGTCAAGA TTGAAGAAGA 
650
ACAGGAAAGG ACAAACCCTG ATCATCATCA TCAAGATTCT GTCACAAACC 
700
CTTTTGATTT CTCTTTCTCT CAGCTTTTGT TAGATCCCAA TTACTATCTG 
750
GGATCAGGAG GGGGAGGAGA AGGAGATTTT GCTATCATGA GCAGCAGCAC 
800
AAACTCACCA TTACCAAACA CAAGTAGTGA TCAACATCCA AGTCAACAGC 
850
AAGAGATTCT TCAATGGTTT GGGAGCAGTA ACTTTCAGAC AGAAGCAATC 
900
AACGATATGT TCATAAACAA CAACAACAAC ATAGTGAATC TTGAGACCAT 
950
CGAGAACACA AAAGTCTATG GAGACGCCTC AGTAGCCGGA GCCGCTGTCC 
1000
GAGCAGCTTT GGGCGGAGGG ACAACGAGTA CATCGGCGGA TCAAAGTACA 
1050
ATAAGTTGGG AGGATATAAC TTCTCTAGTT AATTCCGAAG ATGCAAGTTA 
1100
CTTCAATGCG CCAAATCATG TGTAA
1150

>AT5G65790.1 longest ORF length:374
MGRAPCCDKA NVKKGPWSPE EDAKLKDYIE NSGTGGNWIA LPQKIGLRRC 
50
GKSCRLRWLN YLRPNIKHGG FSEEEDNIIC NLYVTIGSRW SIIAAQLPGR 
100
TDNDIKNYWN TRLKKKLLNK QRKEFQEARM KQEMVMMKRQ QQGQGQGQSN 
150
GSTDLYLNNM FGSSPWPLLP QLPPPHHQIP LGMMEPTSCN YYQTTPSCNL 
200
EQKPLITLKN MVKIEEEQER TNPDHHHQDS VTNPFDFSFS QLLLDPNYYL 
250
GSGGGGEGDF AIMSSSTNSP LPNTSSDQHP SQQQEILQWF GSSNFQTEAI 
300
NDMFINNNNN IVNLETIENT KVYGDASVAG AAVRAALGGG TTSTSADQST 
350
ISWEDITSLV NSEDASYFNA PNHV
400