fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G66270 Zinc finger C-x8-C-x5-C-x3-H type family protein (.1)

>AT5G66270.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, NdeI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 1086
HindIII A|AGCTT 284
KpnI GGTAC|C 996
NcoI C|CATGG 689
PstI CTGCA|G 446, 491
PvuII CAG|CTG 449, 899
StyI C|C[AT][AT]GG 689, 1232
XbaI T|CTAGA 1089


Click here to view TAIR data

>AT5G66270.1 length:1350
ATGATGAAGA AAACGAAGAA AGGGAGAGTA TCGTGGGCAT CAGATAGTAT 
50
GCTTTGTCAG GTAAAGTTGT TTCTTAGTGA TGATTGTCCC GTTAAAGTTG 
100
CATCGAATCT TCCACCTGGT TTTGAAGCTA CTGATTATGC AACGAAGCGA 
150
ATCATCTCAC ACATTCCTCG GATCAAATGG AAACGCCCAC CATTGTTTGT 
200
CCTCGATGAT GCTTTGCTTG TTGGGAGTGG TGGAAAAAGC ATCGAGACTC 
250
GTTCTGAGAA TCTTAGGATT TCTAAAGTCT TGGAAGCTTT CTATCCACAT 
300
CGCTCTGTGA TCCCTTCTCG TCCTTCGCTC ACACTAGCTG TTGAAGAAGA 
350
ACACTATGAC GACGGCAAAA CTCCTAATAT CCCTCTCACT CACGTTGAAG 
400
ATGAACGTGA CGCTGCTGCT GAATCTTCCC ACAGTTTCGA AGCTCCTGCA 
450
GCTGTTTCTG GACTTGGACC AGAGTTAAGT CTTCTTGCTT CTGCAGCTTT 
500
GTCTGCCTTA ACTAAGGAAC AGGGCTCTCA GGTCGATCCT GATTTACTTG 
550
TCAAGTTACT CAGTGACCCC AAAATCGTTG AGAACTTGAT CAATGGCATG 
600
AAAGGTAAAC CACTTGAAAC TGCAAATAAC AGTCTAAACA CTGACATCAC 
650
CGAACCTAGA CTTGCTCCTC AACATGTCAC CTCCACAACC ATGGACAGAA 
700
ACCCACCTCC CATGCCTGGA AATGTTGCGC CACATAATGT ACCTGTTTCG 
750
GTTCAGTCCA GTGCTACAGA TCCTCCACTC CCCAAACCCA ATCAGCCCAT 
800
GTCCAGTGCT CTCTCAATGA ACCTTACCCT CCAGAAACCC ACCCCGGTTG 
850
TTCACAACTA TCCATTGTCT TCTGGGATCA AAGTTGAGGA TTCTTACACA 
900
GCTGCTCCCT TGAAACCAAG CACAGGGGAT GATGTTGTAG TCTCAGAACA 
950
AAAGACCCAA CTCCTTTTCC CTTGCAGCTC TTGGAATATG AATAAGGTAC 
1000
CGGAGTCAGC GCGAACTGAA ACAGATCCTC AAATCCGTAA TGGTAACACA 
1050
AACCGGGATG ATCAGGTTTC TGCAAAACCC GTGAAAGATC TAGACTACTT 
1100
CAAGAACCTC ATTAGGGAAC ATGGGGCAGT CAAACCGGCA ACAACTGAAA 
1150
CTAACAATTA CAAAGGAAGA GTTGATCATA AGAAAATCGT AAAGGTTAGG 
1200
ATTCAGAAAC CGTGCATGTA TTTTAACAGG CCCAAGGGGT GTCGGATGGG 
1250
CGAGAGTTGC TTGTATCTTC ACGACAGTTC TAAAAGGTTA TGGACTGATG 
1300
TTGCACCTCC TCACTTTCCC AGAGCTAAGA GACTCAAGTT TGGATCGTAA 
1350

>AT5G66270.1 longest ORF length:449
MMKKTKKGRV SWASDSMLCQ VKLFLSDDCP VKVASNLPPG FEATDYATKR 
50
IISHIPRIKW KRPPLFVLDD ALLVGSGGKS IETRSENLRI SKVLEAFYPH 
100
RSVIPSRPSL TLAVEEEHYD DGKTPNIPLT HVEDERDAAA ESSHSFEAPA 
150
AVSGLGPELS LLASAALSAL TKEQGSQVDP DLLVKLLSDP KIVENLINGM 
200
KGKPLETANN SLNTDITEPR LAPQHVTSTT MDRNPPPMPG NVAPHNVPVS 
250
VQSSATDPPL PKPNQPMSSA LSMNLTLQKP TPVVHNYPLS SGIKVEDSYT 
300
AAPLKPSTGD DVVVSEQKTQ LLFPCSSWNM NKVPESARTE TDPQIRNGNT 
350
NRDDQVSAKP VKDLDYFKNL IREHGAVKPA TTETNNYKGR VDHKKIVKVR 
400
IQKPCMYFNR PKGCRMGESC LYLHDSSKRL WTDVAPPHFP RAKRLKFGS
450