|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT5G66300 | ANAC105, VND3 | VASCULAR-RELATED NAC-DOMAIN 3, Arabidopsis NAC domain containing protein 105, NAC domain containing protein 105 (.1) |
>AT5G66300.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRI, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI
| Name | Recognition sequence | Cut positions |
| BamHI | G|GATCC | 522 |
| EcoRV | GAT|ATC | 827 |
| NcoI | C|CATGG | 160 |
| SacI | GAGCT|C | 798 |
| StyI | C|C[AT][AT]GG | 160 |
| XbaI | T|CTAGA | 831 |
| XhoI | C|TCGAG | 421, 718 |
Click here to view TAIR data
>AT5G66300.1 length:879
ATGATGAAGG TTGATCAAGA TTATTCGTGT AGTATACCGC CTGGATTTAG | 50 |
GTTTCATCCG ACAGATGAAG AACTTGTCGG ATATTATCTC AAGAAGAAAA | 100 |
TCGCCTCCCA GAGGATTGAT CTCGACGTTA TCAGAGAAAT TGATCTTTAC | 150 |
AAGATCGAAC CATGGGATCT ACAAGAGAGA TGTAGGATAG GGTACGAGGA | 200 |
GCAAACGGAG TGGTATTTCT TCAGCCATAG AGACAAGAAG TATCCGACTG | 250 |
GGACTAGGAC AAACCGAGCC ACCGTGGCCG GTTTCTGGAA AGCAACGGGC | 300 |
CGGGACAAGG CGGTTTACCT CAACTCCAAA CTTATCGGTA TGAGAAAAAC | 350 |
GCTTGTCTTT TACCGAGGTC GAGCGCCTAA TGGCCAAAAG TCCGATTGGA | 400 |
TCATTCACGA ATACTACAGC CTCGAGTCAC ACCAGAACTC TCCTCCACAG | 450 |
GAAGAAGGAT GGGTAGTGTG TAGAGCATTT AAGAAACGAA CGACCATCCC | 500 |
AACAAAAAGG AGGCAACTTT GGGATCCGAA CTGCTTATTC TACGACGACG | 550 |
CCACTCTCTT GGAACCTCTC GACAAGCGAG CCAGACATAA TCCTGATTTT | 600 |
ACCGCCACAC CGTTCAAGCA AGAACTACTC TCCGAGGCCA GTCACGTCCA | 650 |
GGATGGAGAT TTCGGATCTA TGTACCTTCA ATGCATCGAT GATGATCAAT | 700 |
TCTCCCAGCT TCCTCAGCTC GAGAGCCCCT CTCTTCCGTC GGAAATAACT | 750 |
CCCCATAGTA CTACTTTTTC TGAGAACAGT AGCCGGAAAG ATGACATGAG | 800 |
CTCCGAGAAG AGGATCACTG ACTGGAGATA TCTAGATAAG TTCGTGGCGT | 850 |
CTCAATTTTT GATGAGTGGA GAAGACTAA | 900 |
>AT5G66300.1 longest ORF length:292
MMKVDQDYSC SIPPGFRFHP TDEELVGYYL KKKIASQRID LDVIREIDLY | 50 |
KIEPWDLQER CRIGYEEQTE WYFFSHRDKK YPTGTRTNRA TVAGFWKATG | 100 |
RDKAVYLNSK LIGMRKTLVF YRGRAPNGQK SDWIIHEYYS LESHQNSPPQ | 150 |
EEGWVVCRAF KKRTTIPTKR RQLWDPNCLF YDDATLLEPL DKRARHNPDF | 200 |
TATPFKQELL SEASHVQDGD FGSMYLQCID DDQFSQLPQL ESPSLPSEIT | 250 |
PHSTTFSENS SRKDDMSSEK RITDWRYLDK FVASQFLMSG ED | 300 |