fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G66320 GATA5 GATA transcription factor 5 (.1.2)

>AT5G66320.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, SacI, SmaI, SpeI, StyI, XbaI
Name Recognition sequence Cut positions
HpaI GTT|AAC 426
PstI CTGCA|G 455, 724
PvuII CAG|CTG 730, 982
SalI G|TCGAC 112
XhoI C|TCGAG 640, 891


Click here to view TAIR data

>AT5G66320.2 length:1020
ATGGAACAAG CCGCGTTGAA GAGCAGCGTC AGGAAAGAGA TGGCTCTCAA 
50
AACGACTTCT CCGGTTTACG AAGAGTTTCT TGCCGTCACC ACCGCTCAAA 
100
ATGGCTTTTC CGTCGACGAT TTCTCTGTAG ACGACTTGCT TGACTTGTCA 
150
AACGATGACG TTTTTGCCGA CGAAGAAACT GACCTCAAGG CTCAACATGA 
200
GATGGTCCGT GTTTCCTCTG AGGAACCCAA CGACGACGGA GACGCTCTTC 
250
GCCGGAGCAG CGATTTCTCC GGCTGTGACG ACTTTGGTTC TCTCCCTACA 
300
AGCGAACTCT CTCTTCCGGC GGATGATTTA GCGAACCTTG AGTGGCTCTC 
350
TCATTTCGTG GAGGACTCCT TCACGGAATA TTCGGGTCCA AACCTCACCG 
400
GAACCCCGAC TGAGAAACCG GCGTGGTTAA CGGGTGACCG GAAACATCCT 
450
GTGACTGCAG TCACGGAAGA GACCTGTTTC AAATCCCCTG TTCCGGCTAA 
500
AGCCCGTAGC AAACGTAACC GCAATGGCCT CAAGGTCTGG TCGCTTGGTT 
550
CGTCGTCCTC CTCGGGTCCT TCCTCGTCCG GTTCGACCTC CTCCTCCTCT 
600
TCGGGTCCTT CCAGCCCGTG GTTCTCCGGC GCTGAGCTGC TCGAGCCTGT 
650
GGTCACGTCA GAGAGGCCAC CGTTTCCCAA GAAGCATAAG AAAAGGTCAG 
700
CCGAGTCTGT TTTCTCCGGT GAGCTGCAGC AGCTGCAACC TCAGCGAAAG 
750
TGCAGCCACT GCGGCGTTCA GAAAACTCCG CAGTGGAGAG CCGGGCCAAT 
800
GGGAGCCAAG ACCCTGTGCA ATGCGTGCGG TGTCCGGTAC AAGTCGGGTA 
850
GGTTGCTACC GGAATACAGA CCCGCTTGTA GCCCGACATT CTCGAGTGAG 
900
CTGCACTCGA ACCACCACCG GAAAGTCATA GAGATGAGGC GGAAGAAGGA 
950
GCCAACCAGT GACAACGAAA CCGGTTTAAA CCAGCTGGTT CAGTCCCCAC 
1000
AAGCTGTACC AAGTTTTTGA 
1050

>AT5G66320.2 longest ORF length:339
MEQAALKSSV RKEMALKTTS PVYEEFLAVT TAQNGFSVDD FSVDDLLDLS 
50
NDDVFADEET DLKAQHEMVR VSSEEPNDDG DALRRSSDFS GCDDFGSLPT 
100
SELSLPADDL ANLEWLSHFV EDSFTEYSGP NLTGTPTEKP AWLTGDRKHP 
150
VTAVTEETCF KSPVPAKARS KRNRNGLKVW SLGSSSSSGP SSSGSTSSSS 
200
SGPSSPWFSG AELLEPVVTS ERPPFPKKHK KRSAESVFSG ELQQLQPQRK 
250
CSHCGVQKTP QWRAGPMGAK TLCNACGVRY KSGRLLPEYR PACSPTFSSE 
300
LHSNHHRKVI EMRRKKEPTS DNETGLNQLV QSPQAVPSF
350