fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G66730 IDD1, ENY INDETERMINATE DOMAIN 1, ENHYDROUS, C2H2-like zinc finger protein (.1)

>AT5G66730.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, KpnI, NdeI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 357
EcoRI G|AATTC 786, 1317
HindIII A|AGCTT 839
HpaI GTT|AAC 1419
NcoI C|CATGG 256, 1001
PvuII CAG|CTG 659
SacI GAGCT|C 1303
StyI C|C[AT][AT]GG 256, 482, 560, 1001


Click here to view TAIR data

>AT5G66730.1 length:1503
ATGCCGGTTG ATTTAGATAA TTCCTCTACA GTTTCCGGCG ATGCAAGCGT 
50
CTCATCGACC GGAAACCAAA ATCTAACTCC TAAATCCGTC GGGAAGAAGA 
100
AACGGAATCT TCCTGGAATG CCTGATCCAG ACGCTGAAGT GATAGCTTTG 
150
TCACCTAAAA CACTTATGGC AACGAATCGA TTCGTTTGCG AAATCTGTAA 
200
CAAAGGTTTT CAACGTGACC AGAATCTTCA GCTTCATCGT CGTGGTCACA 
250
ATCTTCCATG GAAACTTCGA CAGAGATCGA CTAAAGAAGT GAGGAAGAAG 
300
GTTTATGTTT GTCCTGTTTC TGGCTGTGTT CATCATGACC CTTCACGTGC 
350
TCTTGGAGAT CTTACTGGAA TCAAGAAACA CTTTTGTCGG AAACACGGCG 
400
AGAAGAAATG GAAGTGTGAG AAATGTTCTA AGAAGTATGC TGTTCAATCA 
450
GATTGGAAAG CTCATTCGAA GATTTGTGGC ACCAAGGAGT ATAAATGCGA 
500
TTGTGGAACT CTGTTTTCTA GGAGAGATAG CTTTATAACG CATAGAGCCT 
550
TTTGTGATGC CTTGGCTGAA GAGAGTGCGA AGAATCATAC TCAAAGCAAG 
600
AAACTTTATC CAGAAACTGT CACTAGGAAG AATCCTGAAA TTGAGCAAAA 
650
ATCTCCAGCA GCTGTTGAGT CTTCTCCGTC ATTACCGCCT TCTTCTCCGC 
700
CATCGGTTGC TATAGCTCCG GCACCGGCTA TTTCGGTTGA GACTGAGTCT 
750
GTCAAAATCA TATCTTCCTC TGTTTTGCCG ATTCAGAATT CTCCAGAATC 
800
TCAAGAAAAC AACAATCATC CTGAAGTCAT TATTGAGGAA GCTTCAAGAA 
850
CGATCGGGTT CAATGTTAGC TCATCGGATC TAAGCAATGA TCACAGTAAC 
900
AACAATGGTG GATACGCAGG TTTGTTTGTA TCATCAACAG CTTCGCCTAG 
950
TTTATATGCT TCCTCAACCG CTTCTCCAAG TCTATTCGCA CCATCGTCCT 
1000
CCATGGAACC CATCTCTCTC TGTCTCTCGA CGAACCCTTC TTTGTTCGGA 
1050
CCAACAATAC GAGATCCGCC ACATTTCCTA ACTCCTCTCC CTCCTCAACC 
1100
GGCAATGTCA GCTACTGCAT TGCTCCAAAA AGCTGCACAA ATGGGTTCCA 
1150
CGGGATCAGG AGGTTCGTTG CTTCGCGGGT TAGGCATAGT TTCAACTACT 
1200
TCTTCATCTA TGGAACTCAG CAATCATGAT GCATTGTCAT TAGCTCCTGG 
1250
TCTTGGACTT GGACTACCTT GTAGCAGCGG TGGTAGCGGA TCGGGTCTAA 
1300
AAGAGCTCAT GATGGGGAAT TCATCGGTGT TTGGTCCGAA ACAGACGACA 
1350
CTAGACTTTC TTGGATTAGG AAGAGCTGTT GGTAATGGTG GTAATACCGG 
1400
AGGTGGATTG TCTGCTCTGT TAACTTCTAT AGGTGGTGGA GGTGGAATCG 
1450
ATCTGTTTGG ATCAGGGGAG TTTTCAGGCA AAGACATTGG AAGAAGTTCG 
1500
TAA
1550

>AT5G66730.1 longest ORF length:500
MPVDLDNSST VSGDASVSST GNQNLTPKSV GKKKRNLPGM PDPDAEVIAL 
50
SPKTLMATNR FVCEICNKGF QRDQNLQLHR RGHNLPWKLR QRSTKEVRKK 
100
VYVCPVSGCV HHDPSRALGD LTGIKKHFCR KHGEKKWKCE KCSKKYAVQS 
150
DWKAHSKICG TKEYKCDCGT LFSRRDSFIT HRAFCDALAE ESAKNHTQSK 
200
KLYPETVTRK NPEIEQKSPA AVESSPSLPP SSPPSVAIAP APAISVETES 
250
VKIISSSVLP IQNSPESQEN NNHPEVIIEE ASRTIGFNVS SSDLSNDHSN 
300
NNGGYAGLFV SSTASPSLYA SSTASPSLFA PSSSMEPISL CLSTNPSLFG 
350
PTIRDPPHFL TPLPPQPAMS ATALLQKAAQ MGSTGSGGSL LRGLGIVSTT 
400
SSSMELSNHD ALSLAPGLGL GLPCSSGGSG SGLKELMMGN SSVFGPKQTT 
450
LDFLGLGRAV GNGGNTGGGL SALLTSIGGG GGIDLFGSGE FSGKDIGRSS 
500