fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G66940 AtDof5. 8 Dof-type zinc finger DNA-binding family protein (.1)

>AT5G66940.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 10
StyI C|C[AT][AT]GG 51


Click here to view TAIR data

>AT5G66940.1 length:678
ATGCCTTCTG AATTCAGTGA ATCTCGTCGG GTTCCTAAGA TTCCCCACGG 
50
CCAAGGAGGA TCTGTTGCGA TTCCGACGGA TCAACAAGAG CAGCTTTCTT 
100
GTCCTCGCTG TGAATCAACC AACACCAAGT TCTGTTACTA CAACAACTAC 
150
AACTTCTCAC AACCTCGTCA TTTCTGCAAG TCTTGTCGCC GTTACTGGAC 
200
TCATGGAGGT ACTCTCCGTG ACATTCCCGT CGGTGGTGTT TCCCGTAAAA 
250
GCTCAAAACG TTCCCGGACT TATTCCTCTG CCGCTACCAC CTCCGTTGTC 
300
GGAAGCCGGA ACTTTCCCTT ACAAGCTACG CCTGTTCTTT TCCCTCAGTC 
350
GTCTTCCAAC GGCGGTATCA CGACGGCGAA GGGAAGTGCT TCGTCGTTCT 
400
ATGGCGGTTT CAGCTCTTTG ATCAACTACA ACGCCGCCGT GAGCAGAAAT 
450
GGGCCTGGTG GCGGGTTTAA TGGGCCAGAT GCTTTTGGTC TTGGGCTTGG 
500
TCACGGGTCG TATTATGAGG ACGTCAGATA TGGGCAAGGA ATAACGGTCT 
550
GGCCGTTTTC AAGTGGCGCT ACTGATGCTG CAACTACTAC AAGCCACATT 
600
GCTCAAATAC CCGCCACGTG GCAGTTTGAA GGTCAAGAGA GCAAAGTCGG 
650
GTTCGTGTCT GGAGACTACG TAGCGTGA
700

>AT5G66940.1 longest ORF length:225
MPSEFSESRR VPKIPHGQGG SVAIPTDQQE QLSCPRCEST NTKFCYYNNY 
50
NFSQPRHFCK SCRRYWTHGG TLRDIPVGGV SRKSSKRSRT YSSAATTSVV 
100
GSRNFPLQAT PVLFPQSSSN GGITTAKGSA SSFYGGFSSL INYNAAVSRN 
150
GPGGGFNGPD AFGLGLGHGS YYEDVRYGQG ITVWPFSSGA TDAATTTSHI 
200
AQIPATWQFE GQESKVGFVS GDYVA
250