fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G66980 AP2/B3-like transcriptional factor family protein (.1)

>AT5G66980.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 355
EcoRI G|AATTC 49
HpaI GTT|AAC 565, 708


Click here to view TAIR data

>AT5G66980.1 length:1005
ATGGTTGATC TCAGTAAAGA CTTACAATTT TTCAAGGTCT TTCTCCCTGA 
50
ATTCGGTTCT CACGAACTGG TGATTCCTCC TGCATTCATC GATATGTTAG 
100
AGAAACCATT ACCTAAAGAA GCGTTCTTAG TCGATGAGAT TGGACGGTTA 
150
TGGTGTGTAG AGACTAAAAC AGAAGATACA GAAGAAAGAT TCTGTGTTTT 
200
CTTCACAAAA GGTTGGCAAA GTTTCGCAAA CGATCAATCT CTTGAATTTG 
250
GAGACTTCCT TGTCTTCAGC TACGACGGCG ATTCCAGATT CTCCGTTACG 
300
ATTTTCGCTA ATGACGGATG TAAAAAAGAT GTTGGTGTCG TCTCAACCAC 
350
GGATAGATCT AGGGTTTCTC TTGATGAGGA AGAACCGGAT GATATTTTTA 
400
CTAAACCGGA TCGTATGAGA GATTGTGATT GTGGCCAGAG CATTAACCGG 
450
AAACGGAAAC GCGATTCGGT TAATGAAGAC CCTCACGTAC TGGTTGATGA 
500
TAAACCGGAG TATGTTTCAA CTTACAAAAC CAAACCGGAG CATAGTGAAA 
550
AGACTCAGAG AACAGTTAAC CGGGCTGGAG ATACTTGTGA CATATCATGG 
600
TTTCCAGAGA AGAAACACAA TGGATTTGAA GAATCGGTTT ACAAACCCAA 
650
GCATCCGCAT TTTGTTAGGA ATATCACAAG AGGTTCACTT CAGAAATTGG 
700
AATTACCGTT AACTTTTCTG AGATCGAACG GGATTGAATT GGAGGAAGAT 
750
ATTGAGCTTT GTGATGAAAG TGGAAAGAAG TGGCCTTTGA AGATTCTGAA 
800
TCACGACAGA GGATTCAAGT TCTCGCATGA ATCATGGTTG TGTTTCTGTA 
850
AAAGCCATGA GATGATACTG ACCAATAAGT GTCTATTTGA GTTTATTGTC 
900
CCAAGTAATG GGAGATGCAG TGAGATTCTA GTTCGTATTG TCAGTGGGAG 
950
ATTGCCTACC ACTATGACCA AAAATAATTA CCAAGTTATT GATATGCAAC 
1000
CTTAA
1050

>AT5G66980.1 longest ORF length:334
MVDLSKDLQF FKVFLPEFGS HELVIPPAFI DMLEKPLPKE AFLVDEIGRL 
50
WCVETKTEDT EERFCVFFTK GWQSFANDQS LEFGDFLVFS YDGDSRFSVT 
100
IFANDGCKKD VGVVSTTDRS RVSLDEEEPD DIFTKPDRMR DCDCGQSINR 
150
KRKRDSVNED PHVLVDDKPE YVSTYKTKPE HSEKTQRTVN RAGDTCDISW 
200
FPEKKHNGFE ESVYKPKHPH FVRNITRGSL QKLELPLTFL RSNGIELEED 
250
IELCDESGKK WPLKILNHDR GFKFSHESWL CFCKSHEMIL TNKCLFEFIV 
300
PSNGRCSEIL VRIVSGRLPT TMTKNNYQVI DMQP
350