fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G67000 Integrase-type DNA-binding superfamily protein (.1)

>AT5G67000.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 411
EcoRV GAT|ATC 204


Click here to view TAIR data

>AT5G67000.1 length:555
ATGCTCACTC CCTTTTGTTC TTCACACCAT TTGCAGGAAA AAATGAATAG 
50
TTGTCAGTCT AATCCCACCA AAATGGATAA TTCAGAAAAT GTTCTATTTA 
100
ATGATCAAAA CGAAAATTTC ACACTTGTTG CACCACACCC TTCTTCTTCG 
150
TACTTGACAA GAGATCAAGA GCACGAGATC ATGGTCTCTG CTCTGCGACA 
200
AGTGATATCT AACTCCGGAG CTGACGACGC GTCATCATCA AACTTGATCA 
250
TCACAAGCGT TCCGCCTCCA GACGCTGGCC CTTGTCCTCT CTGTGGCGTC 
300
GCCGGTTGCT ACGGCTGCAC ATTACAACGG CCGCACCGAG AGGTAAAGAA 
350
GGAGAAGAAA TACAAAGGAG TAAGGAAAAA ACCATCGGGT AAATGGGCGG 
400
CGGAGATATG GGATCCGAGA TCGAAATCAA GGAGGTGGCT TGGAACGTTT 
450
CTTACGGCGG AGATGGCGGC ACAATCTTAC AATGATGCGG CGGCTGAGTA 
500
TCGAGCAAGA CGTGGTAAAA CAAACGGAGA AGGAATTAAA CGGCGGTGGA 
550
GATGA
600

>AT5G67000.1 longest ORF length:184
MLTPFCSSHH LQEKMNSCQS NPTKMDNSEN VLFNDQNENF TLVAPHPSSS 
50
YLTRDQEHEI MVSALRQVIS NSGADDASSS NLIITSVPPP DAGPCPLCGV 
100
AGCYGCTLQR PHREVKKEKK YKGVRKKPSG KWAAEIWDPR SKSRRWLGTF 
150
LTAEMAAQSY NDAAAEYRAR RGKTNGEGIK RRWR
200