fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G67060 HEC1, bHLH088 HECATE 1, basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT5G67060.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 43


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>AT5G67060.1 length:726
ATGGATTCTG ACATAATGAA CATGATGATG CATCAGATGG AGAAGCTTCC 
50
TGAGTTTTGT AACCCTAATT CCTCTTTCTT CTCTCCCGAC CACAACAACA 
100
CTTACCCTTT TCTCTTTAAC TCCACTCATT ACCAGTCCGA TCACTCAATG 
150
ACCAACGAAC CAGGTTTCCG CTACGGTTCC GGTTTACTCA CTAACCCTTC 
200
TTCTATCTCT CCCAACACAG CTTACTCTTC CGTTTTTCTT GACAAAAGAA 
250
ACAACAGTAA CAACAACAAT AATGGCACGA ACATGGCAGC TATGCGAGAG 
300
ATGATCTTCC GTATCGCCGT GATGCAACCG ATCCATATCG ATCCCGAGGC 
350
GGTTAAGCCA CCGAAGAGGA GGAACGTCAG GATCTCTAAA GATCCTCAAA 
400
GCGTGGCGGC TAGGCATAGA AGGGAGAGAA TAAGCGAGAG GATTCGGATT 
450
TTGCAACGGC TTGTTCCTGG TGGGACGAAG ATGGATACAG CTTCGATGCT 
500
CGATGAAGCA ATTCATTATG TGAAGTTTTT AAAGAAACAG GTGCAGTCTC 
550
TGGAGGAGCA GGCGGTGGTT ACTGGCGGAG GGGGAGGAGG AGGAGGAAGG 
600
GTTTTGATCG GTGGAGGTGG AATGACGGCG GCGAGTGGTG GTGGTGGCGG 
650
CGGGGGAGTG GTTATGAAAG GGTGTGGAAC AGTGGGGACT CATCAGATGG 
700
TGGGCAATGC ACAGATTCTT AGATGA
750

>AT5G67060.1 longest ORF length:241
MDSDIMNMMM HQMEKLPEFC NPNSSFFSPD HNNTYPFLFN STHYQSDHSM 
50
TNEPGFRYGS GLLTNPSSIS PNTAYSSVFL DKRNNSNNNN NGTNMAAMRE 
100
MIFRIAVMQP IHIDPEAVKP PKRRNVRISK DPQSVAARHR RERISERIRI 
150
LQRLVPGGTK MDTASMLDEA IHYVKFLKKQ VQSLEEQAVV TGGGGGGGGR 
200
VLIGGGGMTA ASGGGGGGGV VMKGCGTVGT HQMVGNAQIL R
250