Locus |
Common name |
Short description |
AT5G67411 |
|
GRAS family transcription factor (.1) |
>AT5G67411.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
363 |
HpaI
| GTT|AAC |
280 |
NcoI
| C|CATGG |
26 |
SalI
| G|TCGAC |
414 |
StyI
| C|C[AT][AT]GG |
26, 560 |
Click here to view TAIR data
>AT5G67411.1 length:609
ATGCAAATCC CTACTCTTAT AGACTCCATG GCAAACAAAC TCCACAAAAA | 50 |
ACCGCCTCCG CTTCTCAAAC TCACCGTCAT TGCTTCCGAC GCTGAATTTC | 100 |
ATCCGCCGCC GTTGCTCGGA ATCTCCTACG AAGAGCTAGG TTCAAAGCTA | 150 |
GTAAACTTCG CAACCACACG TAACGTTGCA ATGGAGTTTA GAATCATATC | 200 |
TTCTTCTTAC TCCGACGGCC TCTCCTCCCT TATCGAACAA CTAAGAATCG | 250 |
ACCCATTCGT CTTCAACGAA GCTCTCGTCG TTAACTGCCA CATGATGCTT | 300 |
CACTATATCC CCGACGAAAT ATTAACTTCG AATCTCCGAT CAGTTTTCTT | 350 |
GAAAGAACTT CGAGATCTAA ACCCAACGAT CGTAACCCTT ATCGACGAAG | 400 |
ACTCGGATTT CACGTCGACT AACTTTATCT CCAGGTTACG GTCTCTTTAT | 450 |
AACTACATGT GGATTCCTTA CGATACCGCC GAGATGTTTT TGACACGTGG | 500 |
TAGCGAGCAA AGACAGTGGT ATGAGGCAGA TATAAGTTGG AAGATAGATA | 550 |
ACGTAGTAGC CAAGGAAGGT GCGGAGAGAG TGGAGAGATT AGAGCCGAAG | 600 |
AGCCGGTGA | 650 |
>AT5G67411.1 longest ORF length:202
MQIPTLIDSM ANKLHKKPPP LLKLTVIASD AEFHPPPLLG ISYEELGSKL | 50 |
VNFATTRNVA MEFRIISSSY SDGLSSLIEQ LRIDPFVFNE ALVVNCHMML | 100 |
HYIPDEILTS NLRSVFLKEL RDLNPTIVTL IDEDSDFTST NFISRLRSLY | 150 |
NYMWIPYDTA EMFLTRGSEQ RQWYEADISW KIDNVVAKEG AERVERLEPK | 200 |
SR | 250 |
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