Locus |
Common name |
Short description |
AT5G67420 |
ASL39, LBD37 |
ASYMMETRIC LEAVES2-LIKE 39, LOB domain-containing protein 37 (.1) |
>AT5G67420.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BlpI, BmrI, BpmI, BsaAI, BsaHI, BsaI, BsaJI, BsaXI, BseRI, BsgI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspDI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrFI, BsrGI, BssHII, BssSI, BstBI, BstEII, BstF5I, BstNI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cfr10I, ClaI, DraI, DraIII, DrdI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, N.BstNBI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NlaIV, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuII, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TliI, Tth111I, XhoI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AccII(FnuDII)
| CG|CG |
305 |
AccIII(BspMII)
| T|CCGGA |
26, 165 |
AciI
| C|CGC |
81, 156 |
AluI
| AG|CT |
2, 208, 333, 473, 555 |
ApoI
| Pu|AATTPy |
121 |
BfaI
| C|TAG |
477, 483 |
BglII
| A|GATCT |
398, 481, 487 |
BsaBI
| GATNN|NNATC |
486, 531 |
BsaWI
| [AT]|CCGG[AT] |
26, 165 |
BsiEI
| CGPuPy|CG |
129, 441 |
BslI
| CCNNNNN|NNGG |
237 |
BspEI
| T|CCGGA |
26, 165 |
BsrDI
| GCAATGNN| |
10 |
BsrI
| ACTGGN| |
262, 269 |
BssKI
| |CCNGG |
329, 655 |
BstAPI
| GCANNNN|NTGC |
13 |
BstUI
| CG|CG |
305 |
BstYI
| Pu|GATCPy |
398, 481, 487 |
Cac8I
| GCN|NGC |
361, 594 |
DdeI
| C|TNAG |
394, 644 |
DpnI
| GA-CH3|TC |
325, 397, 440, 480, 486, 560, 621 |
DpnII
| |GATC |
325, 397, 440, 480, 486, 560, 621 |
EaeI
| Py|GGCCPu |
58, 129 |
EagI
| C|GGCCG |
129 |
Fnu4HI
| GC|NGC |
4, 37, 285, 307, 349, 617 |
HaeIII
| GG|CC |
57, 95, 128 |
HincII
| GTPy|PuAC |
235 |
HindIII
| A|AGCTT |
209 |
HinfI
| G|ANTC |
168, 416, 432, 466, 498, 651 |
HpaI
| GTT|AAC |
235 |
HpaII
| C|CGG |
25, 55, 164, 329, 654 |
Hpy188I
| TCN|GA |
247, 381, 393, 509, 534, 552, 645 |
Hpy99I
| CG[AT]CG| |
113, 511, 634, 661, 673 |
HpyCH4III
| ACN|GT |
105, 222, 297, 632, 703 |
HpyCH4IV
| A|CGT |
175, 517 |
HpyCH4V
| TG|CA |
5, 35, 401 |
MboI
| |GATC |
325, 397, 440, 480, 486, 560, 621 |
MseI
| T|TAA |
234, 317, 588, 735, 748 |
MslI
| CAPyNN|NNPuTG |
409 |
MspA1I
| C[AC]G|C[GT]G |
158 |
MspI
| C|CGG |
25, 55, 164, 329, 654 |
MwoI
| GCNNNNN|NNGC |
13 |
NciI
| CC|[CG]GG |
329, 655 |
NlaIII
| CATG| |
60, 142 |
PvuI
| CGAT|CG |
441 |
RsaI
| GT|AC |
700 |
Sau3AI
| |GATC |
325, 397, 440, 480, 486, 560, 621 |
ScrFI
| CC|NGG |
329, 655 |
SmlI
| C|TPyPuAG |
92, 471 |
Taqƒ¿I
| T|CGA |
635 |
TfiI
| G|A[AT]TC |
168, 416, 432, 466, 498 |
TseI
| G|C[AT]GC |
4, 37 |
Tsp45I
| |GT[CG]AC |
685 |
Tsp509I
| |AATT |
44, 120, 578 |
TspRI
| NNCA[CG]TGNN| |
300 |
XbaI
| T|CTAGA |
478, 484 |
XcmI
| CCANNNNN|NNNNTGG |
70 |
Click here to view TAIR data
>AT5G67420.1 length:753
ATGAGCTGCA ATGGTTGCCG TGTTCTCCGG AAAGGTTGCA GCGAGAATTG | 50 |
TATCCTCCGG CCATGTATTC AATGGATTGA AACCGCCGAT GCTCAAGGCC | 100 |
ACGCCACCGT CTTCGTCGCT AAATTCTTCG GCCGTGCTGG TCTCATGTCC | 150 |
TTTATCTCCG CTGTTCCGGA TTCTCAACGT CCTGCTTTGT TTCAGTCGTT | 200 |
GCTCTACGAA GCTTGTGGAA GAACTGTCAA TCCAGTTAAC GGAGCAATCG | 250 |
GAATGTTATG GACTGGAAAC TGGAATATCT GTCAAGCGGC TGTTGAAACA | 300 |
GTGCTTCGCG GCGGTTCTTT AAGACCGATC CCGGAGCTTC TCACTCACGG | 350 |
CGGCGGTTTC GCTGGCTTTC CTTCGCCTAC ATCTGAAGAA GCATCTGAGA | 400 |
TCTGCACCGA AATGTTGAAT CTCCAGCAAA ATGATTCCAC CGATCGTAAC | 450 |
ATCTATCATC ATTCACGATT CTCAAGCTCT AGATCTAGAT CTACTATGGA | 500 |
TTCTTCTTCT CCGACGAAAC GTAAGAGATT ATCATCGGAA GACCAACCAT | 550 |
CTTCGGAGCT TGATCTATCT CTCATCCCTA ATTTTCCCAT TAAGCAAGCA | 600 |
ACACCTTCTT CTACACGGCG GCGATCAGTA ACACCGTCGA TGAACTCAGA | 650 |
GGACTCCGGG ACGACGACGA CTACGACGGC GTTTTGTGAC AAGGGTGATG | 700 |
TGTACGGTAA CGGAGGAGGA GAAACGACCA AGTTGCTTAA CCTTTTTGTT | 750 |
TAA | 800 |
>AT5G67420.1 longest ORF length:250
MSCNGCRVLR KGCSENCILR PCIQWIETAD AQGHATVFVA KFFGRAGLMS | 50 |
FISAVPDSQR PALFQSLLYE ACGRTVNPVN GAIGMLWTGN WNICQAAVET | 100 |
VLRGGSLRPI PELLTHGGGF AGFPSPTSEE ASEICTEMLN LQQNDSTDRN | 150 |
IYHHSRFSSS RSRSTMDSSS PTKRKRLSSE DQPSSELDLS LIPNFPIKQA | 200 |
TPSSTRRRSV TPSMNSEDSG TTTTTTAFCD KGDVYGNGGG ETTKLLNLFV | 250 |
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