fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G67580 ATTBP3, TRB2, ATTRB2 TELOMERE-BINDING PROTEIN 3, TELOMERE REPEAT BINDING FACTOR 2, Homeodomain-like/winged-helix DNA-binding family protein (.1.2)

>AT5G67580.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 878
HindIII A|AGCTT 863
PstI CTGCA|G 731, 740
StyI C|C[AT][AT]GG 892


Click here to view TAIR data

>AT5G67580.1 length:900
ATGGGTGCAC CAAAGCAGAA GTGGACACCG GAAGAAGAAG CAGCTCTTAA 
50
AGCTGGAGTT CTTAAGCATG GGACTGGGAA GTGGCGTACC ATACTCTCGG 
100
ATACTGAGTT TAGTTTAATC CTTAAGTCTC GCTCTAATGT TGATCTTAAG 
150
GACAAATGGA GAAATATAAG CGTGACAGCT TTATGGGGTT CAAGGAAGAA 
200
GGCTAAACTT GCGCTTAAGA GGACTCCACC AGGTACTAAA CAGGATGATA 
250
ACAACACAGC TCTTACCATT GTGGCTTTGA CTAATGATGA TGAACGTGCA 
300
AAACCAACTT CCCCCGGAGG TTCTGGTGGT GGATCACCAC GCACTTGTGC 
350
TTCTAAGAGA TCAATTACAA GTTTGGATAA GATCATCTTT GAGGCAATTA 
400
CCAACTTGAG GGAACTACGC GGTTCTGACA GAACATCAAT CTTTCTGTAT 
450
ATAGAGGAGA ATTTCAAGAC TCCACCGAAT ATGAAAAGGC ATGTCGCAGT 
500
ACGATTAAAG CATTTATCAT CGAATGGAAC ATTAGTTAAG ATAAAGCACA 
550
AGTACAGGTT TTCTTCTAAT TTTATTCCCG CAGGTGCAAG ACAGAAGGCT 
600
CCTCAACTCT TTCTGGAAGG AAACAACAAG AAAGACCCAA CAAAACCCGA 
650
GGAGAACGGT GCCAACAGTC TCACTAAATT CCGAGTAGAC GGTGAATTAT 
700
ATATGATAAA AGGCATGACA GCTCAAGAAG CTGCAGAGGC TGCAGCAAGA 
750
GCAGTTGCAG AGGCAGAATT TGCTATCACA GAGGCTGAAC AAGCAGCAAA 
800
AGAGGCAGAA AGAGCAGAAG CAGAAGCTGA AGCTGCTCAG ATATTTGCAA 
850
AGGCAGCCAT GAAAGCTTTG AAGTTCAGGA TCCGTAATCA TCCTTGGTGA 
900

>AT5G67580.1 longest ORF length:299
MGAPKQKWTP EEEAALKAGV LKHGTGKWRT ILSDTEFSLI LKSRSNVDLK 
50
DKWRNISVTA LWGSRKKAKL ALKRTPPGTK QDDNNTALTI VALTNDDERA 
100
KPTSPGGSGG GSPRTCASKR SITSLDKIIF EAITNLRELR GSDRTSIFLY 
150
IEENFKTPPN MKRHVAVRLK HLSSNGTLVK IKHKYRFSSN FIPAGARQKA 
200
PQLFLEGNNK KDPTKPEENG ANSLTKFRVD GELYMIKGMT AQEAAEAAAR 
250
AVAEAEFAIT EAEQAAKEAE RAEAEAEAAQ IFAKAAMKAL KFRIRNHPW
300