Locus |
Common name |
Short description |
AT5G67580 |
ATTBP3, TRB2, ATTRB2 |
TELOMERE-BINDING PROTEIN 3, TELOMERE REPEAT BINDING FACTOR 2, Homeodomain-like/winged-helix DNA-binding family protein (.1.2) |
>AT5G67580.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
878 |
HindIII
| A|AGCTT |
863 |
PstI
| CTGCA|G |
731, 740 |
StyI
| C|C[AT][AT]GG |
892 |
Click here to view TAIR data
>AT5G67580.2 length:900
ATGGGTGCAC CAAAGCAGAA GTGGACACCG GAAGAAGAAG CAGCTCTTAA | 50 |
AGCTGGAGTT CTTAAGCATG GGACTGGGAA GTGGCGTACC ATACTCTCGG | 100 |
ATACTGAGTT TAGTTTAATC CTTAAGTCTC GCTCTAATGT TGATCTTAAG | 150 |
GACAAATGGA GAAATATAAG CGTGACAGCT TTATGGGGTT CAAGGAAGAA | 200 |
GGCTAAACTT GCGCTTAAGA GGACTCCACC AGGTACTAAA CAGGATGATA | 250 |
ACAACACAGC TCTTACCATT GTGGCTTTGA CTAATGATGA TGAACGTGCA | 300 |
AAACCAACTT CCCCCGGAGG TTCTGGTGGT GGATCACCAC GCACTTGTGC | 350 |
TTCTAAGAGA TCAATTACAA GTTTGGATAA GATCATCTTT GAGGCAATTA | 400 |
CCAACTTGAG GGAACTACGC GGTTCTGACA GAACATCAAT CTTTCTGTAT | 450 |
ATAGAGGAGA ATTTCAAGAC TCCACCGAAT ATGAAAAGGC ATGTCGCAGT | 500 |
ACGATTAAAG CATTTATCAT CGAATGGAAC ATTAGTTAAG ATAAAGCACA | 550 |
AGTACAGGTT TTCTTCTAAT TTTATTCCCG CAGGTGCAAG ACAGAAGGCT | 600 |
CCTCAACTCT TTCTGGAAGG AAACAACAAG AAAGACCCAA CAAAACCCGA | 650 |
GGAGAACGGT GCCAACAGTC TCACTAAATT CCGAGTAGAC GGTGAATTAT | 700 |
ATATGATAAA AGGCATGACA GCTCAAGAAG CTGCAGAGGC TGCAGCAAGA | 750 |
GCAGTTGCAG AGGCAGAATT TGCTATCACA GAGGCTGAAC AAGCAGCAAA | 800 |
AGAGGCAGAA AGAGCAGAAG CAGAAGCTGA AGCTGCTCAG ATATTTGCAA | 850 |
AGGCAGCCAT GAAAGCTTTG AAGTTCAGGA TCCGTAATCA TCCTTGGTGA | 900 |
>AT5G67580.2 longest ORF length:299
MGAPKQKWTP EEEAALKAGV LKHGTGKWRT ILSDTEFSLI LKSRSNVDLK | 50 |
DKWRNISVTA LWGSRKKAKL ALKRTPPGTK QDDNNTALTI VALTNDDERA | 100 |
KPTSPGGSGG GSPRTCASKR SITSLDKIIF EAITNLRELR GSDRTSIFLY | 150 |
IEENFKTPPN MKRHVAVRLK HLSSNGTLVK IKHKYRFSSN FIPAGARQKA | 200 |
PQLFLEGNNK KDPTKPEENG ANSLTKFRVD GELYMIKGMT AQEAAEAAAR | 250 |
AVAEAEFAIT EAEQAAKEAE RAEAEAEAAQ IFAKAAMKAL KFRIRNHPW | 300 |
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