fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
>>AT1G01250
Alias
TF Classification
FioreDB
AP2_ERF
(Click to show phylogenetic tree)
RARTF
AP2/EREBP
/ CBF1
AtTFDB
AP2-EREBP
PlnTFDB
AP2-EREBP
(v3.0), AP2-EREBP (v1.0)
DATF
AP2-EREBP
TAIR short description
Integrase-type DNA-binding superfamily protein (.1)
TAIR annotation
encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. (.1)
Gene model
Gene model
cDNA support
AT1G01250.1
21
Entry clone (w/o stop)
IE_08C10
External link
General info
TAIR DATA
Genomic seq
TAIR seq viewer
SNP
SALK SNP Viewer
T-DNA tag line
T-DNA Express
miRNA
Search ASRP
Phylogeny
SALAD database
Promoter
ppdb
Microarray data
FioreDB
ATTED-II
ATTED-II data
NCBI GEO
NCBI GEO profile
NASC
NASCarray_SpotHistory
NASCarray_DigitalNorthern
Genevestigator
Genevestigator
eFP Browser
Developmental Map
Abiotic Stress
AtGenExpress
Development
Hormone
Abiotic Stress
Light
Pathogen
Gene Ontology (GO)
(F) 3677: DNA or RNA binding
->DNA binding
(F) 3700: transcription factor activity
->transcription factor activity, sequence-specific DNA binding
(C) 5634: nucleus
->nucleus
(P) 6351: transcription,DNA-dependent
->transcription, DNA-templated
(P) 6355: other cellular processes
->regulation of transcription, DNA-templated
(P) 9873: signal transduction
->ethylene-activated signaling pathway
miRNA/tasiRNA
Orthologs
Type
Ia
Ib
II
III
Total
poplar
1
3
1
5
soybean
1
3
4
8
rice
sorghum
physcomitrella
Total
2
6
5
13
Repression motif
Repression motif
in putative orthologs
FLDLP
DLSLDL
SHGAD at 189/230 in soybean
Gm011442
(Type III)
Status
Plasmid construction
-> done
Plasmid construction
-> done
Transformed
-> done
T1 seed harvested
-> done
T2 seed harvested
-> done
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants
ID
Species
Construct
Date
Comment
Phenotype
Photo
ID532
Torenia
35S:AtCDS-SRDX
2007-07-06
flower bulk, 1 of 5 lines 
abnormal bud shape 
[Publication link]
Comment