Alias |
AGL28 |
TF Classification |
FioreDB | MADS (Click to show phylogenetic tree) |
RARTF | MADS / SHORT VEGETATIVE PHASE |
AtTFDB | MADS / TypeI |
PlnTFDB | MADS (v3.0), MADS (v1.0) |
DATF | MADS |
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TAIR short description |
AGAMOUS-like 28 (.1) |
TAIR annotation |
AGAMOUS-like 28 (AGL28); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: central cell, embryo, endosperm; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 23 (TAIR:AT1G65360.1); Has 6009 Blast hits to 6009 proteins in 738 species: Archae - 0; Bacteria - 0; Metazoa - 628; Fungi - 306; Plants - 4996; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink). (.1) |
Gene model |
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Entry clone (w/o stop) |
IE_02E01 |
External link |
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Gene Ontology (GO) |
(F) 3677: DNA or RNA binding |
->DNA binding |
(F) 3700: transcription factor activity |
->transcription factor activity, sequence-specific DNA binding |
(P) 45944: other metabolic processes |
->positive regulation of transcription from RNA polymerase II promoter |
(F) 46983: protein binding |
->protein dimerization activity |
(C) 5634: nucleus |
->nucleus |
(P) 6351: transcription,DNA-dependent |
->transcription, DNA-templated |
(F) 977: nucleic acid binding |
->RNA polymerase II regulatory region sequence-specific DNA binding |
(P) 9911: developmental processes |
->positive regulation of flower development |
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miRNA/tasiRNA |
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Orthologs |
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Type |
Ia |
Ib |
II |
III |
Total |
poplar |
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soybean |
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rice |
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sorghum |
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physcomitrella |
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Total |
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0E0 |
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Repression motif |
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Repression motif in putative orthologs |
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Status |
Plasmid construction | -> done |
Plasmid construction | -> done |
Transformed | -> done |
T1 seed harvested | -> done |
T2 seed harvested | -> not_yet |
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CRES-T phenotype from individual project
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CRES-T phenotype from publication |
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CRES-T phenotype from bulk project |
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Phenotype in ornamental plants
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Comment |
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