fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT1G07900 (LBD1)

Alias LBD1
TF Classification
FioreDBAS2 (Click to show phylogenetic tree)
RARTF
AtTFDB
PlnTFDBLOB (v3.0)
DATFAS2
TAIR short description LOB domain-containing protein 1 (.1)
TAIR annotation LOB domain-containing protein 1 (LBD1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1035 Blast hits to 1030 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1035; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). (.1)
Gene model
Gene model cDNA support
AT1G07900.1 2
Entry clone (w/o stop)
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(C) 5634: nucleus ->nucleus
(C) 5739: mitochondria ->mitochondrion
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1 9 11
soybean 1 4 15 20
rice 1 1 3 5
sorghum 1 1 4 6
physcomitrella 1 7 8
Total 4 8 38 50
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
HAETAALQLQLQQQHQ at 111/156 in rice Os039759 (Type III)
HAETAALQLQLQQQHQ at 111/156 in rice Os037274 (Type III)
APSIPALHLRLPTALC at 247/337 in sorghum Sb032110 (Type II)
GAPPPRLRLRLLHLRP at 198/418 in sorghum Sb020619 (Type III)

        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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