fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT1G18750 (AGL65, AGL102)

Alias AGL65, AGL102
TF Classification
FioreDBMADS (Click to show phylogenetic tree)
RARTFMADS / FRUITFULL
AtTFDBMADS / TypeII
PlnTFDBMADS (v3.0), MADS (v1.0)
DATFMADS
TAIR short description AGAMOUS-like 65 (.1.2)
TAIR annotation Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL65 is expressed in pollen.It forms heterodimers with other MICK family members (AGL104). Involved in late stages of pollen development and pollen tube growth. (.1.2)
Gene model
Gene model cDNA support
AT1G18750.1 5
AT1G18750.2 3
Entry clone (w/o stop)
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10152: developmental processes ->pollen maturation
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(P) 45944: other metabolic processes ->positive regulation of transcription from RNA polymerase II promoter
(F) 46983: protein binding ->protein dimerization activity
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 80092: cell organization and biogenesis ->regulation of pollen tube growth
(P) 9555: developmental processes ->pollen development
(F) 982: transcription factor activity ->transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding
(F) 987: nucleic acid binding ->core promoter proximal region sequence-specific DNA binding
miRNA/tasiRNA
Target sequence miRNA/tasiRNA sequence Map
5'--3'

miRN4412: 3'-TTGGTAGTAGTAGTAGTAGT-5'
Orthologs
Type
Ia Ib II III Total
poplar
soybean
rice 1 1
sorghum 1 1
physcomitrella 1 1
Total 3 3
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> not_yet

          
Plasmid construction -> not_yet

          
Transformed -> not_yet

          
T1 seed harvested -> not_yet

          
T2 seed harvested -> not_yet

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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