Alias |
|
TF Classification |
FioreDB | Trihelix (Click to show phylogenetic tree) |
RARTF | Trihelix |
AtTFDB | |
PlnTFDB | |
DATF | |
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TAIR short description |
hydroxyproline-rich glycoprotein family protein (.1) |
TAIR annotation |
hydroxyproline-rich glycoprotein family protein; CONTAINS InterPro DOMAIN/s: MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G35640.1); Has 3054 Blast hits to 2678 proteins in 309 species: Archae - 8; Bacteria - 384; Metazoa - 1064; Fungi - 253; Plants - 884; Viruses - 120; Other Eukaryotes - 341 (source: NCBI BLink). (.1) |
Gene model |
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Entry clone (w/o stop) |
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External link |
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Gene Ontology (GO) |
(F) 3700: transcription factor activity |
->transcription factor activity, sequence-specific DNA binding |
(C) 5634: nucleus |
->nucleus |
(P) 6355: other cellular processes |
->regulation of transcription, DNA-templated |
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miRNA/tasiRNA |
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Orthologs |
|
Type |
Ia |
Ib |
II |
III |
Total |
poplar |
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soybean |
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|
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rice |
|
1 |
|
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1 |
sorghum |
|
1 |
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1 |
physcomitrella |
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|
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Total |
|
2 |
|
|
2 |
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Repression motif |
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Repression motif in putative orthologs |
|
Status |
Plasmid construction | -> The work interrupted(05Nov) |
Plasmid construction | -> The work interrupted(05Nov) |
Transformed | -> not_yet |
T1 seed harvested | -> not_yet |
T2 seed harvested | -> not_yet |
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CRES-T phenotype from individual project
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CRES-T phenotype from publication |
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CRES-T phenotype from bulk project |
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Phenotype in ornamental plants
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Comment |
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