fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT1G54060 (ASIL1)

Alias ASIL1
TF Classification
FioreDBTrihelix (Click to show phylogenetic tree)
RARTFTrihelix
AtTFDBTrihelix
PlnTFDBTrihelix (v3.0), Trihelix (v1.0)
DATFTrihelix
TAIR short description 6B-interacting protein 1-like 1 (.1)
TAIR annotation Member of the trihelix DNA binding protein family. Nuclear localized. Involved in repressing seed maturation genes during seed germination and seedling development. (.1)
Gene model
Gene model cDNA support
AT1G54060.1 47
Entry clone (w/o stop) RE_1012_x
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10029: developmental processes ->regulation of seed germination
(P) 10431: developmental processes ->seed maturation
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 43565: DNA or RNA binding ->sequence-specific DNA binding
(F) 44212: DNA or RNA binding ->transcription regulatory region DNA binding
(P) 48831: developmental processes ->regulation of shoot system development
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(C) 5730: other intracellular components ->nucleolus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other metabolic processes ->regulation of transcription, DNA-templated
(P) 9733: other biological processes ->response to auxin
(P) 9793: developmental processes ->embryo development ending in seed dormancy
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar
soybean
rice
sorghum
physcomitrella
Total 0E0
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> not_yet

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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