fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT1G56650 (ATMYB75, SIAA1, PAP1)

Alias ATMYB75, SIAA1, PAP1
TF Classification
FioreDBMYB (Click to show phylogenetic tree)
RARTFMYB superfamily / ATR1
AtTFDBMYB / R2R3-MYBs
PlnTFDBMYB (v3.0), MYB (v1.0)
DATFMYB
TAIR short description SUC-INDUCED ANTHOCYANIN ACCUMULATION 1, MYELOBLASTOSIS PROTEIN 75, MYB DOMAIN PROTEIN 75, production of anthocyanin pigment 1 (.1)
TAIR annotation Encodes a putative MYB domain containing transcription factor involved in anthocyanin metabolism and radical scavenging. Essential for the sucrose-mediated expression of the dihydroflavonol reductase gene. (.1)
Gene model
Gene model cDNA support
AT1G56650.1 10
Entry clone (w/o stop) RE_1349
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 1135: other molecular functions ->transcription factor activity, RNA polymerase II transcription factor recruiting
(P) 19430: other cellular processes ->removal of superoxide radicals
(P) 30154: other cellular processes ->cell differentiation
(P) 31540: other metabolic processes ->regulation of anthocyanin biosynthetic process
(P) 31542: other metabolic processes ->positive regulation of anthocyanin biosynthetic process
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 43565: DNA or RNA binding ->sequence-specific DNA binding
(F) 44212: nucleic acid binding ->transcription regulatory region DNA binding
(P) 46283: other metabolic processes ->anthocyanin-containing compound metabolic process
(P) 50832: response to stress ->defense response to fungus
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other cellular processes ->regulation of transcription, DNA-templated
(P) 6357: other cellular processes ->regulation of transcription from RNA polymerase II promoter
(P) 9651: response to stress ->response to salt stress
(P) 9718: other metabolic processes ->anthocyanin-containing compound biosynthetic process
(P) 9723: other biological processes ->response to ethylene
(P) 9733: other biological processes ->response to auxin
(P) 9745: other cellular processes ->sucrose mediated signaling
(P) 9753: other biological processes ->response to jasmonic acid
(F) 981: transcription factor activity ->RNA polymerase II transcription factor activity, sequence-specific DNA binding
(P) 9867: signal transduction ->jasmonic acid mediated signaling pathway
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar
soybean
rice
sorghum
physcomitrella
Total 0E0
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project

View all photo        		
        decreased anthocyanin and tannin content in leaves and seeds

         light seed color (direct input)


        		
       

       

        CRES-T phenotype from publication
        
light seed color (PMID12787253)
        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

          

           ID
           Species
           Construct
           Date
           Comment
           Phenotype
           Photo
          

          

           ID85
           Gentiana
           AtACT2pro:AtCDS-SRDX
           2006-03-30
            
           No phenotype 
            
          

          

           ID50037
           Torenia
           35S:AtCDS-VP16
           2006-02-24
            
           darker color 
            
          

          

           ID50061
           Gentiana
           AtACT2p:GtOrtholog-SRDX
           2010-09-08
            
           bicolor 
[Publication link]		
           
          

          

           ID50140
           Eustoma
           35S:AtCDS-SRDX
           2010-11-11
            
           deficiency of pigments accumulation in petals 
           
          

         

         

          Comment