fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
>>AT1G69540 (AGL94)
Alias
AGL94
TF Classification
FioreDB
MADS
(Click to show phylogenetic tree)
RARTF
MADS
/ SEPALLATA1
AtTFDB
MADS
/ TypeII
PlnTFDB
MADS
(v3.0), MADS (v1.0)
DATF
MADS
TAIR short description
AGAMOUS-like 94 (.1)
TAIR annotation
Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. (.1)
Gene model
Gene model
cDNA support
AT1G69540.1
4
Entry clone (w/o stop)
External link
General info
TAIR DATA
Genomic seq
TAIR seq viewer
SNP
SALK SNP Viewer
T-DNA tag line
T-DNA Express
miRNA
Search ASRP
Phylogeny
SALAD database
Promoter
ppdb
Microarray data
FioreDB
ATTED-II
ATTED-II data
NCBI GEO
NCBI GEO profile
NASC
NASCarray_SpotHistory
NASCarray_DigitalNorthern
Genevestigator
Genevestigator
eFP Browser
Developmental Map
Abiotic Stress
AtGenExpress
Development
Hormone
Abiotic Stress
Light
Pathogen
Gene Ontology (GO)
(F) 3677: DNA or RNA binding
->DNA binding
(F) 3700: transcription factor activity
->transcription factor activity, sequence-specific DNA binding
(C) 5634: nucleus
->nucleus
(P) 6355: other cellular processes
->regulation of transcription, DNA-templated
miRNA/tasiRNA
Target sequence
miRNA/tasiRNA sequence
Map
5'--3'
miR5643: 3'-CGTTGGTCTAGAATTTTCGGA-5'
Orthologs
Type
Ia
Ib
II
III
Total
poplar
1
1
2
soybean
rice
sorghum
physcomitrella
Total
1
1
2
Repression motif
Repression motif
in putative orthologs
LNGTA
SLRLRL
AGQYP at 256/344 in poplar
Pt033603
(Type II)
Status
Plasmid construction
-> The work interrupted(06Feb)
Plasmid construction
-> The work interrupted(06Feb)
Transformed
-> not_yet
T1 seed harvested
-> not_yet
T2 seed harvested
-> not_yet
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants
Comment