fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT1G69780 (ATHB13)

Alias ATHB13
TF Classification
FioreDBHD (Click to show phylogenetic tree)
RARTFHB / REVOLUTA/INTERFASCICULAR FIBERLESS1
AtTFDBHomeobox / HD-Zip I
PlnTFDBHB (v3.0), HB (v1.0)
DATFHB
TAIR short description Homeobox-leucine zipper protein family (.1)
TAIR annotation Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. (.1)
Gene model
Gene model cDNA support
AT1G69780.1 71
Entry clone (w/o stop) RE_01G09
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 43565: DNA or RNA binding ->sequence-specific DNA binding
(P) 48826: developmental processes ->cotyledon morphogenesis
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: transcription,DNA-dependent ->regulation of transcription, DNA-templated
(P) 80022: developmental processes ->primary root development
(P) 9744: other biological processes ->response to sucrose
(P) 9965: developmental processes ->leaf morphogenesis
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 2 1 4
soybean 1 6 7
rice 1 1
sorghum 1 1
physcomitrella
Total 3 1 8 1 13
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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