Alias |
ATBZIP44 |
TF Classification |
FioreDB | bZIP (Click to show phylogenetic tree) |
RARTF | TGA3 |
AtTFDB | bZIP |
PlnTFDB | bZIP (v3.0), bZIP (v1.0) |
DATF | bZIP |
|
TAIR short description |
basic leucine-zipper 44 (.1.2) |
TAIR annotation |
basic leucine-zipper 44 (bZIP44); FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 6 (TAIR:AT4G34590.1); Has 1696 Blast hits to 1696 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 67; Plants - 1605; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). (.1) |
Gene model |
|
Entry clone (w/o stop) |
IE_01H05 |
External link |
|
Gene Ontology (GO) |
(F) 3677: DNA or RNA binding |
->DNA binding |
(F) 3700: transcription factor activity |
->transcription factor activity, sequence-specific DNA binding |
(F) 43565: DNA or RNA binding |
->sequence-specific DNA binding |
(F) 44212: nucleic acid binding |
->transcription regulatory region DNA binding |
(F) 46982: protein binding |
->protein heterodimerization activity |
(F) 5515: protein binding |
->protein binding |
(C) 5634: nucleus |
->nucleus |
(P) 6351: transcription,DNA-dependent |
->transcription, DNA-templated |
(P) 6355: other metabolic processes |
->regulation of transcription, DNA-templated |
(P) 9845: developmental processes |
->seed germination |
|
miRNA/tasiRNA |
|
Orthologs |
|
Type |
Ia |
Ib |
II |
III |
Total |
poplar |
1 |
|
2 |
3 |
6 |
soybean |
|
|
5 |
5 |
10 |
rice |
|
|
|
|
|
sorghum |
|
|
|
|
|
physcomitrella |
|
1 |
|
|
1 |
Total |
1 |
1 |
7 |
8 |
17 |
|
Repression motif |
|
Repression motif in putative orthologs |
ASDGARLGLNLNRSEL at 83/259 in physcomitrella Pp005523 (Type Ib)
|
Status |
Plasmid construction | -> done |
Plasmid construction | -> done |
Transformed | -> done |
T1 seed harvested | -> done |
T2 seed harvested | -> not_yet |
|
CRES-T phenotype from individual project
|
|
CRES-T phenotype from publication |
|
CRES-T phenotype from bulk project |
|
Phenotype in ornamental plants
|
ID |
Species |
Construct |
Date |
Comment |
Phenotype |
Photo |
ID50074 |
Torenia |
35S:AtCDS-SRDX |
2008-10-01 |
development bulk, 3 lines  |
big flower (1 line) and small flower (1 line)  [Publication link] |
  |
|
Comment |
|