fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT1G76870

Alias
TF Classification
FioreDBTrihelix (Click to show phylogenetic tree)
RARTFTrihelix
AtTFDB
PlnTFDB
DATFTrihelix
TAIR short description unknown protein
TAIR annotation BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT1G21200.1); Has 406 Blast hits to 351 proteins in 76 species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi - 14; Plants - 127; Viruses - 0; Other Eukaryotes - 126 (source: NCBI BLink).
Gene model
Gene model cDNA support
AT1G76870.1 1
Entry clone (w/o stop) IE_04D10 RE_1013
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(C) 5634: nucleus ->nucleus
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1 2
soybean 1 2 3
rice
sorghum
physcomitrella
Total 2 3 5
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
PALQRSLQLALRNRDD at 259/445 in soybean Gm054925 (Type III)
PALQRSLQLALRSRDD at 262/412 in poplar Pt001187 (Type III)
PALQRSLQLALRSRDD at 262/420 in poplar Pt039865 (Type II)
PALQRSLQLALRNRDD at 261/444 in soybean Gm028530 (Type II)

        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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