Alias |
ATHB17, ATHB-17 |
TF Classification |
FioreDB | HD (Click to show phylogenetic tree) |
RARTF | HB / ATHB-2 |
AtTFDB | Homeobox / HD-Zip II |
PlnTFDB | HB (v3.0), HB (v1.0) |
DATF | HB |
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TAIR short description |
ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 17, homeobox-leucine zipper protein 17 (.1) |
TAIR annotation |
homeobox-leucine zipper protein 17 (HB17); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-leucine zipper protein 18 (TAIR:AT1G70920.1); Has 8030 Blast hits to 8017 proteins in 519 species: Archae - 0; Bacteria - 0; Metazoa - 5631; Fungi - 276; Plants - 1985; Viruses - 4; Other Eukaryotes - 134 (source: NCBI BLink). (.1) |
Gene model |
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Entry clone (w/o stop) |
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External link |
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Gene Ontology (GO) |
(F) 3700: transcription factor activity |
->transcription factor activity, sequence-specific DNA binding |
(F) 43565: DNA or RNA binding |
->sequence-specific DNA binding |
(C) 5634: nucleus |
->nucleus |
(P) 6351: transcription,DNA-dependent |
->transcription, DNA-templated |
(P) 6355: other metabolic processes |
->regulation of transcription, DNA-templated |
(P) 9651: response to abiotic or biotic stimulus |
->response to salt stress |
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miRNA/tasiRNA |
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Orthologs |
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Type |
Ia |
Ib |
II |
III |
Total |
poplar |
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1 |
|
|
1 |
soybean |
|
1 |
|
|
1 |
rice |
|
1 |
|
|
1 |
sorghum |
|
1 |
|
|
1 |
physcomitrella |
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|
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|
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Total |
|
4 |
|
|
4 |
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Repression motif |
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Repression motif in putative orthologs |
PRQKEALALQLKLRPR at 93/192 in poplar Pt041657 (Type Ib)
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Status |
Plasmid construction | -> The work interrupted(06Feb) |
Plasmid construction | -> The work interrupted(06Feb) |
Transformed | -> not_yet |
T1 seed harvested | -> not_yet |
T2 seed harvested | -> not_yet |
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CRES-T phenotype from individual project
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CRES-T phenotype from publication |
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CRES-T phenotype from bulk project |
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Phenotype in ornamental plants
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Comment |
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