| Alias |
|
| TF Classification |
| FioreDB | C3HZnF (Click to show phylogenetic tree) |
| RARTF | |
| AtTFDB | |
| PlnTFDB | C3H (v3.0), C3H (v1.0) |
| DATF | C3H |
|
| TAIR short description |
CCCH-type zinc finger family protein (.1) |
| TAIR annotation |
CCCH-type zinc finger family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); Has 10885 Blast hits to 7444 proteins in 511 species: Archae - 23; Bacteria - 415; Metazoa - 5228; Fungi - 922; Plants - 581; Viruses - 184; Other Eukaryotes - 3532 (source: NCBI BLink). (.1) |
| Gene model |
|
| Entry clone (w/o stop) |
IE_05D01_x |
| External link |
|
| Gene Ontology (GO) |
| (F) 3676: nucleic acid binding |
->nucleic acid binding |
| (F) 3677: DNA or RNA binding |
->DNA binding |
| (F) 3729: DNA or RNA binding |
->mRNA binding |
| (F) 46872: other binding |
->metal ion binding |
| (C) 5634: nucleus |
->nucleus |
|
| miRNA/tasiRNA |
|
| Orthologs |
|
Type |
| Ia |
Ib |
II |
III |
Total |
| poplar |
|
1 |
|
|
1 |
| soybean |
|
1 |
|
|
1 |
| rice |
|
1 |
|
|
1 |
| sorghum |
|
1 |
|
|
1 |
| physcomitrella |
|
|
|
|
|
| Total |
|
4 |
|
|
4 |
|
| Repression motif |
|
Repression motif
in putative orthologs |
|
| Status |
| Plasmid construction | -> done |
| Plasmid construction | -> done |
| Transformed | -> done |
| T1 seed harvested | -> done |
| T2 seed harvested | -> not_yet |
|
| CRES-T phenotype from individual project
|
|
| CRES-T phenotype from publication |
|
| CRES-T phenotype from bulk project |
|
Phenotype in ornamental plants
|
|
| Comment |
|
