fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT2G21230 (AtbZIP30)

Alias AtbZIP30
TF Classification
FioreDBbZIP (Click to show phylogenetic tree)
RARTFbZIP / ABSCISIC ACID-INSENSITIVE5
AtTFDBbZIP
PlnTFDBbZIP (v3.0), bZIP (v1.0)
DATFbZIP
TAIR short description Basic-leucine zipper (bZIP) transcription factor family protein (.1), Basic-leucine zipper (bZIP) transcription factor family protein (.2), Basic-leucine zipper (bZIP) transcription factor family protein (.3)
TAIR annotation Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT4G38900.3); Has 3137 Blast hits to 2142 proteins in 311 species: Archae - 10; Bacteria - 435; Metazoa - 539; Fungi - 212; Plants - 1074; Viruses - 4; Other Eukaryotes - 863 (source: NCBI BLink). (.1)
Gene model
Gene model cDNA support
AT2G21230.1 52
AT2G21230.3 41
AT2G21230.2 23
Entry clone (w/o stop) IE_05A07
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10628: other metabolic processes ->positive regulation of gene expression
(P) 10629: other metabolic processes ->negative regulation of gene expression
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 43565: DNA or RNA binding ->sequence-specific DNA binding
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 6355: transcription,DNA-dependent ->regulation of transcription, DNA-templated
(P) 90567: developmental processes ->reproductive shoot system development
(P) 9737: other biological processes ->response to abscisic acid
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1 2
soybean 1 1
rice
sorghum
physcomitrella
Total 2 1 3
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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