fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
>>AT2G28500 (LBD11)
Alias
LBD11
TF Classification
FioreDB
AS2
(Click to show phylogenetic tree)
RARTF
AtTFDB
PlnTFDB
LOB
(v3.0)
DATF
AS2
TAIR short description
LOB domain-containing protein 11 (.1)
TAIR annotation
LOB domain-containing protein 11 (LBD11); INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 1 (TAIR:AT1G07900.1); Has 1191 Blast hits to 1170 proteins in 85 species: Archae - 8; Bacteria - 66; Metazoa - 21; Fungi - 2; Plants - 1049; Viruses - 10; Other Eukaryotes - 35 (source: NCBI BLink). (.1)
Gene model
Gene model
cDNA support
AT2G28500.1
2
Entry clone (w/o stop)
External link
General info
TAIR DATA
Genomic seq
TAIR seq viewer
SNP
SALK SNP Viewer
T-DNA tag line
T-DNA Express
miRNA
Search ASRP
Phylogeny
SALAD database
Promoter
ppdb
Microarray data
FioreDB
ATTED-II
ATTED-II data
NCBI GEO
NCBI GEO profile
NASC
NASCarray_SpotHistory
NASCarray_DigitalNorthern
Genevestigator
Genevestigator
eFP Browser
Developmental Map
Abiotic Stress
AtGenExpress
Development
Hormone
Abiotic Stress
Light
Pathogen
Gene Ontology (GO)
(C) 5634: nucleus
->nucleus
miRNA/tasiRNA
Orthologs
Type
Ia
Ib
II
III
Total
poplar
1
8
9
soybean
2
15
17
rice
1
2
3
sorghum
1
4
5
physcomitrella
1
2
3
Total
6
31
37
Repression motif
Repression motif
in putative orthologs
APSIP
ALHLRL
PTALC at 247/337 in sorghum
Sb032110
(Type III)
Status
Plasmid construction
-> done
Plasmid construction
-> done
Transformed
-> done
T1 seed harvested
-> done
T2 seed harvested
-> done
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants
Comment