fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT2G32460 (ATMYB101, AtM1)

Alias ATMYB101, AtM1
TF Classification
FioreDBMYB (Click to show phylogenetic tree)
RARTFMYB superfamily / GL1
AtTFDBMYB / R2R3-MYBs
PlnTFDBMYB (v3.0), MYB (v1.0)
DATFMYB
TAIR short description ARABIDOPSIS THALIANA MYB 1, myb domain protein 101 (.1.2)
TAIR annotation Member of the R2R3 factor gene family. (.1.2)
Gene model
Gene model cDNA support
AT2G32460.1 18
AT2G32460.2 10
Entry clone (w/o stop) RE_1371
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10468: other metabolic processes ->regulation of gene expression
(F) 1135: other molecular functions ->transcription factor activity, RNA polymerase II transcription factor recruiting
(P) 1901371: developmental processes ->regulation of leaf morphogenesis
(P) 1990019: cell organization and biogenesis ->protein storage vacuole organization
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(P) 43068: other cellular processes ->positive regulation of programmed cell death
(F) 43565: DNA or RNA binding ->sequence-specific DNA binding
(F) 44212: DNA or RNA binding ->transcription regulatory region DNA binding
(P) 45893: other metabolic processes ->positive regulation of transcription, DNA-templated
(P) 48235: developmental processes ->pollen sperm cell differentiation
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other cellular processes ->regulation of transcription, DNA-templated
(P) 6357: other metabolic processes ->regulation of transcription from RNA polymerase II promoter
(P) 80092: cell organization and biogenesis ->regulation of pollen tube growth
(C) 90406: other cellular components ->pollen tube
(P) 9555: developmental processes ->pollen development
(P) 9739: other biological processes ->response to gibberellin
(P) 9740: signal transduction ->gibberellic acid mediated signaling pathway
(P) 9789: signal transduction ->positive regulation of abscisic acid-activated signaling pathway
(F) 981: transcription factor activity ->RNA polymerase II transcription factor activity, sequence-specific DNA binding
miRNA/tasiRNA
Target sequence miRNA/tasiRNA sequence Map
5'--3'

miR159a: 3'-ATCTCGAGGGAAGTTAGGTTT-5'
5'--3'

miR159b: 3'-TTCTCGAGGGAAGTTAGGTTT-5'
5'--3'

miR159c: 3'-CCTCGAGGGAAGTTAGGTTT-5'
Orthologs
Type
Ia Ib II III Total
poplar 1 1
soybean 1 1
rice
sorghum
physcomitrella
Total 2 2
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

          

           ID
           Species
           Construct
           Date
           Comment
           Phenotype
           Photo
          

          

           ID549
           Torenia
           35S:AtCDS-SRDX
           2007-07-06
           flower bulk, 1 line 
           small flower 
[Publication link]		
           
          

         

         

          Comment