fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT2G33860 (ARF3, ETT)

Alias ARF3, ETT
TF Classification
FioreDBARF (Click to show phylogenetic tree)
RARTFARF / ETTIN/ARF3
AtTFDBARF
PlnTFDBARF (v3.0), ARF (v1.0)
DATFARF
TAIR short description ETTIN, AUXIN RESPONSE TRANSCRIPTION FACTOR 3, Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related (.1)
TAIR annotation ettin (ett) mutations have pleiotropic effects on Arabidopsis flower development, causing increases in perianth organ number, decreases in stamen number and anther formation, and apical-basal patterning defects in the gynoecium. The ETTIN gene encodes a protein with homology to DNA binding proteins which bind to auxin response elements. ETT transcript is expressed throughout stage 1 floral meristems and subsequently resolves to a complex pattern within petal, stamen and carpel primordia. ETT probably functions to impart regional identity in floral meristems that affects perianth organ number spacing, stamen formation, and regional differentiation in stamens and the gynoecium. During stage 5, ETT expression appears in a ring at the top of the floral meristem before morphological appearance of the gynoecium, consistent with the proposal that ETT is involved in prepatterning apical and basal boundaries in the gynoecium primordium. It is a target of the ta-siRNA tasiR-ARF. (.1)
Gene model
Gene model cDNA support
AT2G33860.1 40
Entry clone (w/o stop) RE_0161
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10050: developmental processes ->vegetative phase change
(P) 10158: other cellular processes ->abaxial cell fate specification
(P) 10582: developmental processes ->floral meristem determinacy
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other metabolic processes ->regulation of transcription, DNA-templated
(P) 9733: other biological processes ->response to auxin
(P) 9734: other cellular processes ->auxin-activated signaling pathway
(P) 9850: other metabolic processes ->auxin metabolic process
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1 1 3
soybean 1 4 5
rice 1 1 2
sorghum 1 1 2
physcomitrella
Total 4 7 1 12
Repression motif
Repression motif
in putative orthologs
        
Status
Plasmid construction -> done
Plasmid construction -> done
Transformed -> done
T1 seed harvested -> done
T2 seed harvested -> done
CRES-T phenotype from individual project
View all photo
Mutant-like phenotype (frequency = 100%)
abnormal carpel (direct input), too many rosettes (direct input), sterile or low fertility (direct input), tall height (direct input)
and more...
CRES-T phenotype from publication
CRES-T phenotype from bulk project too large leaf (A20233-23)

abnormal carpel (A20552-82)

Phenotype in ornamental plants

ID Species Construct Date Comment Phenotype Photo
ID36 Chrysanthemum 35S:AtCDS-SRDX 2005-08-18   no phenotype   
ID76 Gentiana AtACT2pro:AtCDS-SRDX 2006-03-30   no phenotype   
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