fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT2G35940 (BLH1, EDA29)

Alias BLH1, EDA29
TF Classification
FioreDBHD (Click to show phylogenetic tree)
RARTFHB / BELL1
AtTFDBHomeobox / BEL
PlnTFDBHB (v3.0), HB (v1.0)
DATFHB
TAIR short description embryo sac development arrest 29, BEL1-like homeodomain 1 (.1.2.3)
TAIR annotation Encodes a member of the BEL-like homeodomain protein family. Ecotopic expression in the embryo sac leads to defects in nuclear migration and cellularization and embryo sacs with multiple egg cells. Loss of function alleles have no female gametophyte defects. The ecotopic expression phenotype requires KNAT3 because it can be suppressed by loss of KNAT3 function alleles. Localized to the nucleus but interaction with OFP1 relocates it to the cytoplasm. (.1), Encodes a member of the BEL-like homeodomain protein family. Ecotopic expression in the embryo sac leads to defects in nuclear migration and cellularization and embryo sacs with multiple egg cells. Loss of function alleles have no female gametophyte defects. The ecotopic expression phenotype requires KNAT3 because it can be suppressed by loss of KNAT3 function alleles. Localized to the nucleus but interaction with OFP1 relocates it to the cytoplasm. (.2), Encodes a member of the BEL-like homeodomain protein family. Ecotopic expression in the embryo sac leads to defects in nuclear migration and cellularization and embryo sacs with multiple egg cells. Loss of function alleles have no female gametophyte defects. The ecotopic expression phenotype requires KNAT3 because it can be suppressed by loss of KNAT3 function alleles. Localized to the nucleus but interaction with OFP1 relocates it to the cytoplasm. (.3)
Gene model
Gene model cDNA support
AT2G35940.1 65
AT2G35940.2 60
AT2G35940.3 60
Entry clone (w/o stop) IE_0082
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10197: developmental processes ->polar nucleus fusion
(P) 10201: response to abiotic or biotic stimulus ->response to continuous far red light stimulus by the high-irradiance response system
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 42803: protein binding ->protein homodimerization activity
(F) 46982: protein binding ->protein heterodimerization activity
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(C) 5737: other cytoplasmic components ->cytoplasm
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other cellular processes ->regulation of transcription, DNA-templated
(P) 9610: response to abiotic or biotic stimulus ->response to symbiotic fungus
(P) 9737: other biological processes ->response to abscisic acid
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 10 11
soybean 1 3 4
rice
sorghum
physcomitrella
Total 2 13 15
Repression motif 
PRAQQGLSLTLSSQQQ at 137/680 in AT2G35940.1
NNNGVSLTLGLPHCDS at 594/680 in AT2G35940.1
PRAQQGLSLTLSSQQQ at 137/680 in AT2G35940.2
NNNGVSLTLGLPHCDS at 594/680 in AT2G35940.2
PRAQQGLSLTLSSQQQ at 137/680 in AT2G35940.3
NNNGVSLTLGLPHCDS at 594/680 in AT2G35940.3
Repression motif
in putative orthologs		 
PRAQQGLSLSLSSQQQ at 122/678 in poplar Pt007786 (Type III)
SGNGVSLTLGLPHCEN at 603/678 in poplar Pt007786 (Type III)
PRAQQGLSLSLSSQQQ at 122/678 in poplar Pt007788 (Type II)
SGNGVSLTLGLPHCEN at 603/678 in poplar Pt007788 (Type II)
PRAQQGLSLSLSSQQQ at 122/678 in poplar Pt007783 (Type III)
SGNGVSLTLGLPHCEN at 603/678 in poplar Pt007783 (Type III)
PRAQQGLSLSLSSQQQ at 122/678 in poplar Pt007782 (Type III)
SGNGVSLTLGLPHCEN at 603/678 in poplar Pt007782 (Type III)
PRAQQGLSLSLSSQKQ at 123/679 in poplar Pt043814 (Type III)
SGNGVSLSLGLPHCEN at 604/679 in poplar Pt043814 (Type III)
PRAQQGLSLSLSSQQQ at 122/678 in poplar Pt007785 (Type III)
SGNGVSLTLGLPHCEN at 603/678 in poplar Pt007785 (Type III)
PRATQGLSLSLHGDHM at 122/661 in soybean Gm027132 (Type III)
GKNGVSLTLGLPHCDT at 588/661 in soybean Gm027132 (Type III)
PRATQGLSLSLHGEEV at 126/664 in soybean Gm004498 (Type III)
GNNGVSLTLGLPHCDT at 591/664 in soybean Gm004498 (Type III)
PRAQQGLSLSLSSQKQ at 123/679 in poplar Pt043813 (Type III)
SGNGVSLSLGLPHCEN at 604/679 in poplar Pt043813 (Type III)
PRAQQGLSLSLSSQQQ at 122/678 in poplar Pt007787 (Type III)
SGNGVSLTLGLPHCEN at 603/678 in poplar Pt007787 (Type III)
PRAQQGLSLSLSSQKQ at 123/679 in poplar Pt043815 (Type III)
SGNGVSLSLGLPHCEN at 604/679 in poplar Pt043815 (Type III)
PRAQQGLSLSLSSQQQ at 122/678 in poplar Pt007784 (Type III)
SGNGVSLTLGLPHCEN at 603/678 in poplar Pt007784 (Type III)
PRATQGLSLSLHGEEV at 126/664 in soybean Gm004499 (Type III)
GNNGVSLTLGLPHCDT at 591/664 in soybean Gm004499 (Type III)
PRAQQGLSLSLSSQKQ at 123/679 in poplar Pt043816 (Type III)
SGNGVSLSLGLPHCEN at 604/679 in poplar Pt043816 (Type III)
PRATQGLSLSLHGEEV at 126/664 in soybean Gm004500 (Type II)
GNNGVSLTLGLPHCDT at 591/664 in soybean Gm004500 (Type II)
Status
Plasmid construction -> done
Plasmid construction -> done
Transformed -> done
T1 seed harvested -> done
T2 seed harvested -> done
CRES-T phenotype from individual project
View all photo 		—t”‘½‚¢(8/46), —t‚É‚Ë‚¶‚ê‚₵‚í‚ ‚è(3/46), ‰Ô•Ù‚ª’Z‚­A‚‚ڂ݂̒iŠK‚Å‚ß‚µ‚ׂª‚Æ‚Ñ‚Å‚ÄŒ©‚¦‚é(8/46), ‚³‚â‚̂Ђ傤–Ê‚²‚‚²‚Â(12/46), ‰ÔŒs‚ª•s–«‚Å‘½”(11/46), (phenotype_A20001:leaf_bushy/flower_‰Ô•Ù’Z‚¢/silique_‚²‚‚²‚Â/dwraf/•s–«)
sterile or low fertility (A20001), abnormal shaped silique (A20001), abnormal petal (A20001), bushy (A20001), dwarf (A20001)
and more...
CRES-T phenotype from publication
CRES-T phenotype from bulk project abnormal leaf (A20264-90)

Phenotype in ornamental plants
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