fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT2G38470 (ATWRKY33, WRKY33)

Alias ATWRKY33, WRKY33
TF Classification
FioreDBWRKY (Click to show phylogenetic tree)
RARTFWRKY(Zn)
AtTFDBWRKY
PlnTFDBWRKY (v3.0), WRKY (v1.0)
DATFWRKY
TAIR short description WRKY DNA-binding protein 33 (.1)
TAIR annotation Member of the plant WRKY transcription factor family. Regulates the antagonistic relationship between defense pathways mediating responses to P. syringae and necrotrophic fungal pathogens. Located in nucleus. Involved in response to various abiotic stresses - especially salt stress. (.1)
Gene model
Gene model cDNA support
AT2G38470.1 75
Entry clone (w/o stop)
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10120: other cellular processes ->camalexin biosynthetic process
(P) 10200: other biological processes ->response to chitin
(P) 10508: other cellular processes ->positive regulation of autophagy
(P) 34605: response to stress ->cellular response to heat
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(P) 42742: response to abiotic or biotic stimulus ->defense response to bacterium
(F) 43565: DNA or RNA binding ->sequence-specific DNA binding
(F) 44212: nucleic acid binding ->transcription regulatory region DNA binding
(P) 50832: response to abiotic or biotic stimulus ->defense response to fungus
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other metabolic processes ->regulation of transcription, DNA-templated
(P) 6970: response to abiotic or biotic stimulus ->response to osmotic stress
(P) 70370: other cellular processes ->cellular heat acclimation
(P) 9408: response to abiotic or biotic stimulus ->response to heat
(P) 9409: response to stress ->response to cold
(P) 9414: response to abiotic or biotic stimulus ->response to water deprivation
(P) 9651: response to abiotic or biotic stimulus ->response to salt stress
miRNA/tasiRNA
Target sequence miRNA/tasiRNA sequence Map
5'--3'

miRN34: 3'-TCCTTACGTTGTGCTCCTGAA-5'
Orthologs
Type
Ia Ib II III Total
poplar 1 2 3
soybean 1 1 2
rice 1 1
sorghum 1 1
physcomitrella
Total 2 2 3 7
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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