| Alias |
|
| TF Classification |
| FioreDB | MADS (Click to show phylogenetic tree) |
| RARTF | MADS / CAULIFLOWER |
| AtTFDB | MADS / TypeI |
| PlnTFDB | MADS (v3.0), MADS (v1.0) |
| DATF | MADS |
|
| TAIR short description |
MADS-box transcription factor family protein (.1.2.3) |
| TAIR annotation |
MADS-box transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: embryo, endosperm; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 46 (TAIR:AT2G28700.1); Has 5309 Blast hits to 5302 proteins in 621 species: Archae - 0; Bacteria - 0; Metazoa - 516; Fungi - 285; Plants - 4425; Viruses - 0; Other Eukaryotes - 83 (source: NCBI BLink). (.1) |
| Gene model |
|
| Entry clone (w/o stop) |
IE_02B02_x |
| External link |
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| Gene Ontology (GO) |
| (F) 3677: DNA or RNA binding |
->DNA binding |
| (F) 3700: transcription factor activity |
->transcription factor activity, sequence-specific DNA binding |
| (C) 5634: nucleus |
->nucleus |
| (P) 6355: other cellular processes |
->regulation of transcription, DNA-templated |
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| miRNA/tasiRNA |
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| Orthologs |
|
Type |
| Ia |
Ib |
II |
III |
Total |
| poplar |
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| soybean |
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| rice |
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| sorghum |
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| physcomitrella |
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| Total |
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0E0 |
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| Repression motif |
|
Repression motif
in putative orthologs |
|
| Status |
| Plasmid construction | -> done |
| Plasmid construction | -> done |
| Transformed | -> done |
| T1 seed harvested | -> done |
| T2 seed harvested | -> not_yet |
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| CRES-T phenotype from individual project
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| CRES-T phenotype from publication |
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| CRES-T phenotype from bulk project |
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Phenotype in ornamental plants
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| Comment |
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