fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
>>AT3G22830 (AT-HSFA6B)
Alias
AT-HSFA6B
TF Classification
FioreDB
HSF
(Click to show phylogenetic tree)
RARTF
HSF
AtTFDB
HSF
PlnTFDB
HSF
(v3.0), HSF (v1.0)
DATF
HSF
TAIR short description
ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR A6B, heat shock transcription factor A6B (.1)
TAIR annotation
member of Heat Stress Transcription Factor (Hsf) family (.1)
Gene model
Gene model
cDNA support
AT3G22830.1
6
Entry clone (w/o stop)
IE_04A03(09A09)
External link
General info
TAIR DATA
Genomic seq
TAIR seq viewer
SNP
SALK SNP Viewer
T-DNA tag line
T-DNA Express
miRNA
Search ASRP
Phylogeny
SALAD database
Promoter
ppdb
Microarray data
FioreDB
ATTED-II
ATTED-II data
NCBI GEO
NCBI GEO profile
NASC
NASCarray_SpotHistory
NASCarray_DigitalNorthern
Genevestigator
Genevestigator
eFP Browser
Developmental Map
Abiotic Stress
AtGenExpress
Development
Hormone
Abiotic Stress
Light
Pathogen
Gene Ontology (GO)
(F) 3677: DNA or RNA binding
->DNA binding
(F) 3700: transcription factor activity
->transcription factor activity, sequence-specific DNA binding
(F) 43565: DNA or RNA binding
->sequence-specific DNA binding
(C) 5634: nucleus
->nucleus
(C) 5737: other cytoplasmic components
->cytoplasm
(P) 6351: transcription,DNA-dependent
->transcription, DNA-templated
(P) 6355: other metabolic processes
->regulation of transcription, DNA-templated
miRNA/tasiRNA
Orthologs
Type
Ia
Ib
II
III
Total
poplar
1
3
4
soybean
1
2
3
rice
1
2
3
sorghum
1
3
4
physcomitrella
Total
4
10
14
Repression motif
Repression motif
in putative orthologs
EFEVP
DLDLAL
NLDEE at 379/448 in soybean
Gm028719
(Type II)
Status
Plasmid construction
-> done
Plasmid construction
-> done
Transformed
-> done
T1 seed harvested
-> done
T2 seed harvested
-> done
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants
Comment