fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT3G23240 (ERF1, ATERF1)

Alias ERF1, ATERF1
TF Classification
FioreDBAP2_ERF (Click to show phylogenetic tree)
RARTFPti4
AtTFDBAP2-EREBP
PlnTFDBAP2-EREBP (v3.0), AP2-EREBP (v1.0)
DATFAP2-EREBP
TAIR short description ethylene response factor 1 (.1)
TAIR annotation encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3. (.1)
Gene model
Gene model cDNA support
AT3G23240.1 16
Entry clone (w/o stop) RE_0090
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(C) 5622: other intracellular components ->intracellular
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other metabolic processes ->regulation of transcription, DNA-templated
(P) 6952: response to stress ->defense response
(P) 9867: other cellular processes ->jasmonic acid mediated signaling pathway
(P) 9873: signal transduction ->ethylene-activated signaling pathway
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 5 6
soybean 1 4 1 6
rice 1 1
sorghum 1 1
physcomitrella
Total 2 2 9 1 14
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project
        
        see TP111(T3ŽíŽq‚ ‚聁¬ŽR‚³‚ñ)

—t‚ª‘å‚«‚¢

         late flowering (direct input)
        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        
         dwarf, 
         dark green leaf, 
         narrow leaf 
         (A20222-190)
         

         late flowering 
         (A20592-135)
         

         dwarf, 
         dark green leaf, 
         narrow leaf 
         (A20222-149)
         

         dwarf, 
         dark green leaf, 
         narrow leaf 
         (A20221-112)
         

         serrated leaf, 
         abnormal shaped leaf, 
         sterile or low fertility 
         (A20593-168)
         


        		
       

       

        Phenotype in ornamental plants


        
         

          

           ID
           Species
           Construct
           Date
           Comment
           Phenotype
           Photo
          

          

           ID38
           Chrysanthemum
           35S:AtCDS-SRDX
           2005-08-18
            
           weak ethylene insensitive (1/25 lines).
Transformant were treated with ethylene at 10 μl l 
           
          

         

         

          Comment