fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT3G63350 (AT-HSFA7B)

Alias AT-HSFA7B
TF Classification
FioreDBHSF (Click to show phylogenetic tree)
RARTFHSF
AtTFDBHSF
PlnTFDBHSF (v3.0), HSF (v1.0)
DATFHSF
TAIR short description HEAT SHOCK TRANSCRIPTION FACTOR A7B, winged-helix DNA-binding transcription factor family protein (.1)
TAIR annotation member of Heat Stress Transcription Factor (Hsf) family (.1)
Gene model
Gene model cDNA support
AT3G63350.1 3
Entry clone (w/o stop)
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 43565: DNA or RNA binding ->sequence-specific DNA binding
(C) 5634: nucleus ->nucleus
(C) 5737: other cytoplasmic components ->cytoplasm
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other metabolic processes ->regulation of transcription, DNA-templated
(P) 9408: response to stress ->response to heat
(P) 9644: response to abiotic or biotic stimulus ->response to high light intensity
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 5 6
soybean 1 7 8
rice 1 2 3
sorghum 1 4 5
physcomitrella 1 1 2
Total 5 19 24
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
EFEVPDLDLALNLDEE at 379/448 in soybean Gm028719 (Type III)

        

       

       

        Status
        
         

          
Plasmid construction -> not_yet

          
Plasmid construction -> not_yet

          
Transformed -> not_yet

          
T1 seed harvested -> not_yet

          
T2 seed harvested -> not_yet

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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