Alias |
|
TF Classification |
FioreDB | GeBP (Click to show phylogenetic tree) |
RARTF | |
AtTFDB | GeBP |
PlnTFDB | GeBP (v3.0), GeBP (v1.0) |
DATF | GeBP |
|
TAIR short description |
DNA-binding storekeeper protein-related transcriptional regulator (.1) |
TAIR annotation |
DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT4G00130.1); Has 6385 Blast hits to 3618 proteins in 495 species: Archae - 4; Bacteria - 719; Metazoa - 1874; Fungi - 800; Plants - 494; Viruses - 72; Other Eukaryotes - 2422 (source: NCBI BLink). (.1) |
Gene model |
|
Entry clone (w/o stop) |
IE_04G03_x |
External link |
|
Gene Ontology (GO) |
(C) 16592: other intracellular components |
->mediator complex |
(C) 5634: nucleus |
->nucleus |
(C) 5730: nucleus |
->nucleolus |
(C) 5829: cytosol |
->cytosol |
(P) 6355: other cellular processes |
->regulation of transcription, DNA-templated |
(C) 9507: chloroplast |
->chloroplast |
|
miRNA/tasiRNA |
Target sequence |
miRNA/tasiRNA sequence |
Map |
5'--3'
|
miR838: 3'-ACACGTTCTTCATCTTCTTTT-5' |
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|
|
Orthologs |
|
Type |
Ia |
Ib |
II |
III |
Total |
poplar |
|
1 |
|
|
1 |
soybean |
|
1 |
|
|
1 |
rice |
|
|
|
|
|
sorghum |
|
|
|
|
|
physcomitrella |
|
|
|
|
|
Total |
|
2 |
|
|
2 |
|
Repression motif |
|
Repression motif in putative orthologs |
|
Status |
Plasmid construction | -> done |
Plasmid construction | -> done |
Transformed | -> done |
T1 seed harvested | -> done |
T2 seed harvested | -> not_yet |
|
CRES-T phenotype from individual project
|
|
CRES-T phenotype from publication |
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CRES-T phenotype from bulk project |
|
Phenotype in ornamental plants
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Comment |
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