fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT4G26640 (ATWRKY20, WRKY20)

Alias ATWRKY20, WRKY20
TF Classification
FioreDBWRKY (Click to show phylogenetic tree)
RARTFWRKY(Zn)
AtTFDBWRKY
PlnTFDBWRKY (v3.0), WRKY (v1.0)
DATFWRKY
TAIR short description WRKY family transcription factor family protein (.1.2)
TAIR annotation member of WRKY Transcription Factor; Group I (.1), member of WRKY Transcription Factor; Group I (.2)
Gene model
Gene model cDNA support
AT4G26640.2 26
AT4G26640.1 19
Entry clone (w/o stop) RE_0778
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 43565: DNA or RNA binding ->sequence-specific DNA binding
(P) 45893: transcription,DNA-dependent ->positive regulation of transcription, DNA-templated
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other metabolic processes ->regulation of transcription, DNA-templated
(P) 9611: response to stress ->response to wounding
(P) 9961: other biological processes ->response to 1-aminocyclopropane-1-carboxylic acid
miRNA/tasiRNA
Target sequence miRNA/tasiRNA sequence Map
5'--3'

miR1888: 3'-AAGAAGTGTTTAGAATTGAAT-5'
Orthologs
Type
Ia Ib II III Total
poplar 1 1 2
soybean 1 3 4
rice 1 1
sorghum
physcomitrella 1 1
Total 2 2 4 8
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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