fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT4G34610 (BLH6)

Alias BLH6
TF Classification
FioreDBHD (Click to show phylogenetic tree)
RARTFHB / BELL1
AtTFDBHomeobox / BEL
PlnTFDBHB (v3.0), HB (v1.0)
DATFHB
TAIR short description BEL1-like homeodomain 6 (.1.2)
TAIR annotation BEL1-like homeodomain 6 (BLH6); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), POX (InterPro:IPR006563), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: BEL1-like homeodomain 7 (TAIR:AT2G16400.1); Has 4819 Blast hits to 4819 proteins in 327 species: Archae - 0; Bacteria - 2; Metazoa - 1855; Fungi - 314; Plants - 2477; Viruses - 0; Other Eukaryotes - 171 (source: NCBI BLink). (.1)
Gene model
Gene model cDNA support
AT4G34610.1 72
AT4G34610.2 68
Entry clone (w/o stop) IE_0094
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 44212: DNA or RNA binding ->transcription regulatory region DNA binding
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other metabolic processes ->regulation of transcription, DNA-templated
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1 2
soybean
rice
sorghum
physcomitrella
Total 1 1 2
Repression motif 
LQTGQGLSLSLGSQIL at 94/532 in AT4G34610.1
GRGDVSLTLGLQNSQG at 468/532 in AT4G34610.1
LQTGQGLSLSLGSQIL at 94/532 in AT4G34610.2
GRGDVSLTLGLQNSQG at 468/532 in AT4G34610.2
Repression motif
in putative orthologs		 
NGSGVSLTLGLQHCEG at 515/584 in poplar Pt022153 (Type III)
SLQGQGLSLSLGTQIQ at 122/605 in poplar Pt019182 (Type II)
NGSGVSLTLGLQHCEG at 536/605 in poplar Pt019182 (Type II)
Status
Plasmid construction -> done
Plasmid construction -> done
Transformed -> done
T1 seed harvested -> done
T2 seed harvested -> done
CRES-T phenotype from individual project
View all photo 		Žq—tF•ªŒú‚­‚¢‚Ñ‚Â(20/24), —cA•¨ŠúFª’Z‚¢(6/24), –{—tF‚â‚â”’‚Á‚Û‚­‚Ђ傤–ʕΕ½‚ÅŒ`‚¢‚т‚ŃVƒrƒA‚¾‚Æ“àŒü‚«ƒJ[ƒ‹(14/20), bushy(9/20), ‰ÔFŠÛ‚Á‚±‚­‚Ä–¢¬n‚È’iŠK‚Å‚ß‚µ‚ׂ̂݌©‚¦‚é(10/20), ‚³‚âF‚²‚‚²‚Â(6/20), ‚â‚â•s–«(9/20), ŽíŽq‚܂΂ç(5/20), ‰ÔŒsF•äó(10/20), ‚»‚Ì‘¼FŒÍŽ€”‘½‚¢(6/20), (phenotype_A20147,A20152:leaf_phenotype—“ŽQÆ/flower_ŠÛ‚Á‚±‚­‚Ä‚ß‚µ‚׏o‚é/silique_‚²‚‚²‚Â/stem_•äó‰Ô˜/ƒƒ[ƒbƒgbushy/•s–«/ŽíŽq‚܂΂ç)
abnormal silique (direct input), sterile or low fertility (direct input, A20147, A20152), abnormal flower (direct input, A20147, A20152), bushy (A20147, A20152), short pedicel (direct input, A20147, A20152), pale green leaf (direct input, A20147, A20152), abnormal shaped leaf (direct input, A20147, A20152), abnormal shaped silique (A20147, A20152), asynmetric cotyledon (direct input), hyponastic leaf (direct input, A20147, A20152), thickened cotyledon (direct input)
and more...
CRES-T phenotype from publication
CRES-T phenotype from bulk project short pedicel, anther indehiscent, abnormal carpel, abnormal flower (A20943-136)
Phenotype in ornamental plants
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