fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT5G05770 (WOX5A, WOX7)

Alias WOX5A, WOX7
TF Classification
FioreDBHD (Click to show phylogenetic tree)
RARTFHB / REVOLUTA/INTERFASCICULAR FIBERLESS1
AtTFDBHomeobox / WOX
PlnTFDBHB (v3.0), HB (v1.0)
DATFHB
TAIR short description WUSCHEL related homeobox 5A, WUSCHEL related homeobox 7 (.1)
TAIR annotation Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. (.1)
Gene model
Gene model cDNA support
AT5G05770.1 4
Entry clone (w/o stop) IE_01G07
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other metabolic processes ->regulation of transcription, DNA-templated
(P) 7275: developmental processes ->multicellular organism development
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 4 5
soybean 1 10 11
rice 1 1
sorghum 1 1
physcomitrella
Total 4 14 18
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
QEEHRTLELFPLHPEG at 213/224 in soybean Gm008857 (Type III)
TGESQTLQLFPLRSGG at 334/386 in poplar Pt027776 (Type III)
ERVIETLQLFPLNSFG at 129/180 in soybean Gm031835 (Type III)
TRPVKTLDLFPLTTTR at 180/200 in soybean Gm018296 (Type III)
NDESQTLQLFPIRSGG at 341/392 in poplar Pt023577 (Type III)
QEEHRTLELFPLHPEG at 219/230 in soybean Gm014041 (Type III)
TREVETLELFPLKSYV at 162/218 in sorghum Sb009023 (Type II)
TRPLKTLDLFPLTTTR at 202/223 in soybean Gm049699 (Type III)
TREVETLELFPLKSYD at 148/200 in rice Os004760 (Type II)
SVESQTLQLFPTRNAD at 314/357 in soybean Gm013075 (Type III)
IREVQTLQLFPLCSDD at 271/316 in poplar Pt035948 (Type III)
ERVMETLQLFPLNSFG at 120/171 in soybean Gm048522 (Type III)
DRVIETLQLFPLNSFG at 125/177 in soybean Gm005098 (Type II)
EQVIETLQLFPLKSFD at 130/181 in poplar Pt042847 (Type III)
EMDRPQLDLRLSFL at 173/181 in poplar Pt042847 (Type III)
ERVIETLQLFPLNSFD at 130/181 in poplar Pt034082 (Type II)
EMDHPHLDLRLSFV at 173/181 in poplar Pt034082 (Type II)

        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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