fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT5G07690 (PMG2, ATMYB29)

Alias PMG2, ATMYB29
TF Classification
FioreDBMYB (Click to show phylogenetic tree)
RARTFMYB superfamily / ATR1
AtTFDBMYB / R2R3-MYBs
PlnTFDBMYB (v3.0), MYB (v1.0)
DATFMYB
TAIR short description PRODUCTION OF METHIONINE-DERIVED GLUCOSINOLATE 2, myb domain protein 29 (.1)
TAIR annotation Encodes a putative transcription factor (MYB29). (.1)
Gene model
Gene model cDNA support
AT5G07690.1 22
Entry clone (w/o stop) RE_02H05
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10105: signal transduction ->negative regulation of ethylene-activated signaling pathway
(P) 10438: response to stress ->cellular response to sulfur starvation
(P) 10439: other metabolic processes ->regulation of glucosinolate biosynthetic process
(F) 1135: other molecular functions ->transcription factor activity, RNA polymerase II transcription factor recruiting
(P) 1905255: other metabolic processes ->regulation of RNA binding transcription factor activity
(P) 2000070: response to stress ->regulation of response to water deprivation
(P) 30154: other cellular processes ->cell differentiation
(P) 31930: signal transduction ->mitochondria-nucleus signaling pathway
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 43565: DNA or RNA binding ->sequence-specific DNA binding
(F) 44212: DNA or RNA binding ->transcription regulatory region DNA binding
(P) 50832: response to stress ->defense response to fungus
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other metabolic processes ->regulation of transcription, DNA-templated
(P) 6357: other metabolic processes ->regulation of transcription from RNA polymerase II promoter
(P) 9414: response to stress ->response to water deprivation
(P) 9611: response to stress ->response to wounding
(P) 9617: response to abiotic or biotic stimulus ->response to bacterium
(P) 9625: response to abiotic or biotic stimulus ->response to insect
(P) 9644: response to abiotic or biotic stimulus ->response to high light intensity
(P) 9682: response to abiotic or biotic stimulus ->induced systemic resistance
(P) 9739: other biological processes ->response to gibberellin
(P) 9751: other biological processes ->response to salicylic acid
(P) 9753: other biological processes ->response to jasmonic acid
(P) 9755: other cellular processes ->hormone-mediated signaling pathway
(F) 981: transcription factor activity ->RNA polymerase II transcription factor activity, sequence-specific DNA binding
(P) 9819: response to abiotic or biotic stimulus ->drought recovery
(P) 9867: signal transduction ->jasmonic acid mediated signaling pathway
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar
soybean
rice
sorghum
physcomitrella
Total 0E0
Repression motif
Repression motif
in putative orthologs
        
Status
Plasmid construction -> done
Plasmid construction -> done
Transformed -> done
T1 seed harvested -> done
T2 seed harvested -> done
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants

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