fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT5G11270 (OCP3)

Alias OCP3
TF Classification
FioreDB
RARTF
AtTFDB
PlnTFDB
DATF
TAIR short description overexpressor of cationic peroxidase 3 (.1)
TAIR annotation Encodes a homeodomain transcription factor involved in mediating resistance to infection by necrotrophic pathogens dependent on perception of jasmonic acid through COI1. Expressed in the nucleus. Downregulated upon fungal infection. Also involved in drought tolerance. (.1)
Gene model
Gene model cDNA support
AT5G11270.1 45
Entry clone (w/o stop) RE_1248
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10118: other cellular processes ->stomatal movement
(P) 2000022: other cellular processes ->regulation of jasmonic acid mediated signaling pathway
(P) 2000071: response to stress ->regulation of defense response by callose deposition
(P) 2229: response to abiotic or biotic stimulus ->defense response to oomycetes
(P) 31347: response to stress ->regulation of defense response
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(P) 42742: response to abiotic or biotic stimulus ->defense response to bacterium
(F) 4601: other enzyme activity ->peroxidase activity
(P) 50832: response to stress ->defense response to fungus
(P) 55114: other metabolic processes ->oxidation-reduction process
(C) 5634: nucleus ->nucleus
(P) 6952: response to stress ->defense response
(P) 9414: response to abiotic or biotic stimulus ->response to water deprivation
(C) 9507: chloroplast ->chloroplast
(P) 9620: response to abiotic or biotic stimulus ->response to fungus
(P) 9682: response to abiotic or biotic stimulus ->induced systemic resistance
(P) 9737: other biological processes ->response to abscisic acid
(P) 9738: other cellular processes ->abscisic acid-activated signaling pathway
(P) 9787: signal transduction ->regulation of abscisic acid-activated signaling pathway
(P) 9867: signal transduction ->jasmonic acid mediated signaling pathway
miRNA/tasiRNA
Target sequence miRNA/tasiRNA sequence Map
5'--3'

miRN4412: 3'-TTGGTAGTAGTAGTAGTAGT-5'
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project
        
        cotyledon fusion, very low frequency


         fused cotyledon (direct input)
        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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