fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT5G13790 (AGL15)

Alias AGL15
TF Classification
FioreDBMADS (Click to show phylogenetic tree)
RARTFMADS / SHORT VEGETATIVE PHASE
AtTFDBMADS / TypeII
PlnTFDBMADS (v3.0), MADS (v1.0)
DATFMADS
TAIR short description AGAMOUS-like 15 (.1)
TAIR annotation AGL15 (AGAMOUS-Like 15) is a member of the MADS domain family of regulatory factors. Although AGL15 is preferentially expressed during embryogenesis, AGL15 is also expressed in leaf primordia, shoot apical meristems and young floral buds, suggesting that AGL15 may play a role during post-germinative development. Transgenic plants that ectopically express AGL15 show delays in the transition to flowering, perianth abscission and senescence and fruit and seed maturation. Role in embryogenesis and gibberellic acid catabolism. Targets B3 domain transcription factors that are key regulators of embryogenesis. (.1)
Gene model
Gene model cDNA support
AT5G13790.1 10
Entry clone (w/o stop) RE_1294
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10047: other biological processes ->fruit dehiscence
(P) 10227: developmental processes ->floral organ abscission
(P) 10262: developmental processes ->somatic embryogenesis
(P) 10629: other metabolic processes ->negative regulation of gene expression
(P) 2000692: developmental processes ->negative regulation of seed maturation
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 42803: protein binding ->protein homodimerization activity
(F) 43565: DNA or RNA binding ->sequence-specific DNA binding
(P) 45487: other cellular processes ->gibberellin catabolic process
(P) 45892: other metabolic processes ->negative regulation of transcription, DNA-templated
(P) 45893: other metabolic processes ->positive regulation of transcription, DNA-templated
(P) 45944: other cellular processes ->positive regulation of transcription from RNA polymerase II promoter
(F) 4601: other enzyme activity ->peroxidase activity
(P) 48577: response to abiotic or biotic stimulus ->negative regulation of short-day photoperiodism, flowering
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(C) 5737: other cytoplasmic components ->cytoplasm
(P) 60862: developmental processes ->negative regulation of floral organ abscission
(P) 60867: developmental processes ->fruit abscission
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 71365: other cellular processes ->cellular response to auxin stimulus
(F) 977: DNA or RNA binding ->RNA polymerase II regulatory region sequence-specific DNA binding
(P) 9793: developmental processes ->embryo development ending in seed dormancy
(P) 9910: developmental processes ->negative regulation of flower development
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1
soybean
rice
sorghum
physcomitrella
Total 1 1
Repression motif 
TDSDTTLQLGLPGEAH at 209/268 in AT5G13790.1
Repression motif
in putative orthologs
Status
Plasmid construction -> done
Plasmid construction -> done
Transformed -> done
T1 seed harvested -> done
T2 seed harvested -> done
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants
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