Alias
AGL2, SEP1
TF Classification
FioreDB MADS (Click to show phylogenetic tree)
RARTF MADS / SEPALLATA1
AtTFDB MADS / TypeII
PlnTFDB MADS (v3.0), MADS (v1.0)
DATF MADS
TAIR short description
SEPALLATA1, AGAMOUS-like 2, K-box region and MADS-box transcription factor family protein (.1.2)
TAIR annotation
Encodes a MADS box transcription factor involved flower and ovule development. Functionally redundant with SEP2 and SEP3. (.1.2)
Gene model
Entry clone (w/o stop)
RE_02F08
External link
Gene Ontology (GO)
(P) 30154: other cellular processes
->cell differentiation
(F) 3677: DNA or RNA binding
->DNA binding
(F) 3700: transcription factor activity
->transcription factor activity, sequence-specific DNA binding
(P) 45944: other cellular processes
->positive regulation of transcription from RNA polymerase II promoter
(F) 46983: protein binding
->protein dimerization activity
(P) 48481: developmental processes
->plant ovule development
(F) 5515: protein binding
->protein binding
(C) 5634: nucleus
->nucleus
(P) 6351: transcription,DNA-dependent
->transcription, DNA-templated
(P) 6355: transcription,DNA-dependent
->regulation of transcription, DNA-templated
(F) 977: nucleic acid binding
->RNA polymerase II regulatory region sequence-specific DNA binding
(P) 9908: developmental processes
->flower development
miRNA/tasiRNA
Orthologs
Repression motif
Repression motif in putative orthologs
GDMNKQLRLKL EAEGF at 164/245 in soybean Gm017817 (Type III)
WGVCGSLSLSL CVCVC at 32/401 in sorghum Sb023523 (Type II)
GDMNKQLRLKL EAEGF at 164/245 in soybean Gm005933 (Type III)
EANQERLHLAL DPSLH at 202/225 in sorghum Sb003019 (Type III)
EVGRNELDLTL EPLYS at 220/236 in soybean Gm044291 (Type III)
Status
Plasmid construction -> done
Plasmid construction -> done
Transformed -> done
T1 seed harvested -> done
T2 seed harvested -> not_yet
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
dwarf ,
abnormal flower ,
fasciated stem
(A20672-94)
Phenotype in ornamental plants
Comment