Alias |
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TF Classification |
FioreDB | HD (Click to show phylogenetic tree) |
RARTF | HB / ANTHOCYANINLESS2 |
AtTFDB | Homeobox / Similar to HOX7 (tomato) |
PlnTFDB | HB (v3.0), HB (v1.0) |
DATF | HB |
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TAIR short description |
Homeodomain-like transcriptional regulator (.1.2) |
TAIR annotation |
Homeodomain-like transcriptional regulator; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), DDT domain, subgroup (InterPro:IPR018500), DDT domain (InterPro:IPR004022), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-1 (TAIR:AT1G28420.1); Has 67503 Blast hits to 37811 proteins in 2117 species: Archae - 251; Bacteria - 7621; Metazoa - 32181; Fungi - 4940; Plants - 2680; Viruses - 355; Other Eukaryotes - 19475 (source: NCBI BLink). (.1) |
Gene model |
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Entry clone (w/o stop) |
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External link |
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Gene Ontology (GO) |
(P) 10228: developmental processes |
->vegetative to reproductive phase transition of meristem |
(F) 3700: transcription factor activity |
->transcription factor activity, sequence-specific DNA binding |
(F) 43565: DNA or RNA binding |
->sequence-specific DNA binding |
(P) 45892: transcription,DNA-dependent |
->negative regulation of transcription, DNA-templated |
(F) 5515: protein binding |
->protein binding |
(C) 5634: nucleus |
->nucleus |
(P) 6351: transcription,DNA-dependent |
->transcription, DNA-templated |
(P) 6355: other metabolic processes |
->regulation of transcription, DNA-templated |
(P) 9908: developmental processes |
->flower development |
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miRNA/tasiRNA |
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Orthologs |
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Type |
Ia |
Ib |
II |
III |
Total |
poplar |
1 |
|
1 |
|
2 |
soybean |
|
1 |
|
|
1 |
rice |
|
|
|
|
|
sorghum |
|
1 |
|
|
1 |
physcomitrella |
|
1 |
|
|
1 |
Total |
1 |
3 |
1 |
|
5 |
|
Repression motif |
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Repression motif in putative orthologs |
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Status |
Plasmid construction | -> not_yet |
Plasmid construction | -> not_yet |
Transformed | -> not_yet |
T1 seed harvested | -> not_yet |
T2 seed harvested | -> not_yet |
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CRES-T phenotype from individual project
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CRES-T phenotype from publication |
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CRES-T phenotype from bulk project |
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Phenotype in ornamental plants
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Comment |
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