fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT5G60910 (FUL, AGL8)

Alias FUL, AGL8
TF Classification
FioreDBMADS (Click to show phylogenetic tree)
RARTFMADS / FRUITFULL
AtTFDBMADS / TypeII
PlnTFDBMADS (v3.0), MADS (v1.0)
DATFMADS
TAIR short description FRUITFULL, AGAMOUS-like 8 (.1.2)
TAIR annotation MADS box gene negatively regulated by APETALA1 (.1.2)
Gene model
Gene model cDNA support
AT5G60910.1 30
AT5G60910.2 12
Entry clone (w/o stop) RE_02F10
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10077: other biological processes ->maintenance of inflorescence meristem identity
(P) 10154: developmental processes ->fruit development
(P) 30154: other cellular processes ->cell differentiation
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(P) 45944: other cellular processes ->positive regulation of transcription from RNA polymerase II promoter
(F) 46983: protein binding ->protein dimerization activity
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other cellular processes ->regulation of transcription, DNA-templated
(F) 977: nucleic acid binding ->RNA polymerase II regulatory region sequence-specific DNA binding
(P) 9908: developmental processes ->flower development
(P) 9911: developmental processes ->positive regulation of flower development
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 2 3 5
soybean 1 4 5 10
rice 1 1
sorghum 1 2 3
physcomitrella
Total 2 7 10 19
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
EVGRHELDLTLEPLYS at 209/225 in soybean Gm022643 (Type III)
ARRNYELDLTLEPIYS at 223/241 in poplar Pt042631 (Type II)
EVGRNELDLTLEPLYS at 220/236 in soybean Gm044291 (Type III)
ELGRNGLDLTLEPLYS at 227/243 in soybean Gm003795 (Type III)
ELGRNGLDLTLEPLYS at 227/243 in soybean Gm000791 (Type III)

        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project

View all photo        		
        fruitfull-like

         short silique (direct input)


 and more...        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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