fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT5G65050 (MAF2, AGL31)

Alias MAF2, AGL31
TF Classification
FioreDBMADS (Click to show phylogenetic tree)
RARTFMADS / SEPALLATA1
AtTFDBMADS / TypeII
PlnTFDBMADS (v3.0), MADS (v1.0)
DATFMADS
TAIR short description MADS AFFECTING FLOWERING 2, AGAMOUS-like 31 (.1.2.3)
TAIR annotation Originally published as Agamous like MADS-box protein AGL31. One of a group of MADS box genes involved in control of flowering time. Four variant sequences have been identified for this locus but have not been characterized for differences in expression pattern and/or function. (.1), Originally published as Agamous like MADS-box protein AGL31. One of a group of MADS box genes involved in control of flowering time. Four variant sequences have been identified for this locus but have not been characterized for differences in expression pattern and/or function. (.2), Originally published as Agamous like MADS-box protein AGL31. One of a group of MADS box genes involved in control of flowering time. Four variant sequences have been identified for this locus but have not been characterized for differences in expression pattern and/or function. (.3)
Gene model
Gene model cDNA support
AT5G65050.3 20
AT5G65050.1 17
AT5G65050.2 7
Entry clone (w/o stop) IE_01H07_x
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10048: response to abiotic or biotic stimulus ->vernalization response
(P) 10221: response to stress ->negative regulation of vernalization response
(P) 30154: other cellular processes ->cell differentiation
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(P) 45944: other cellular processes ->positive regulation of transcription from RNA polymerase II promoter
(F) 46983: protein binding ->protein dimerization activity
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other metabolic processes ->regulation of transcription, DNA-templated
(F) 977: nucleic acid binding ->RNA polymerase II regulatory region sequence-specific DNA binding
(P) 9908: developmental processes ->flower development
(P) 9910: developmental processes ->negative regulation of flower development
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar
soybean
rice
sorghum
physcomitrella
Total 0E0
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> not_yet

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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