Alias
ATHB8, ATHB-8
TF Classification
FioreDB HD (Click to show phylogenetic tree)
RARTF HB / REVOLUTA/INTERFASCICULAR FIBERLESS1
AtTFDB Homeobox / HD-Zip III
PlnTFDB HB (v3.0), HB (v1.0)
DATF HB
TAIR short description
homeobox gene 8 (.1)
TAIR annotation
member of homeodomain-leucine zipper family, acting as a differentiation-promoting transcription factor of the vascular meristems. (.1)
Gene model
Entry clone (w/o stop)
RE_0563_x
External link
Gene Ontology (GO)
(P) 10014: other biological processes
->meristem initiation
(P) 10067: developmental processes
->procambium histogenesis
(P) 10072: developmental processes
->primary shoot apical meristem specification
(P) 10089: other biological processes
->xylem development
(P) 30154: other cellular processes
->cell differentiation
(F) 3677: DNA or RNA binding
->DNA binding
(F) 3700: transcription factor activity
->transcription factor activity, sequence-specific DNA binding
(P) 45597: other cellular processes
->positive regulation of cell differentiation
(C) 5634: nucleus
->nucleus
(P) 6351: transcription,DNA-dependent
->transcription, DNA-templated
(P) 6355: other metabolic processes
->regulation of transcription, DNA-templated
(P) 8284: other cellular processes
->positive regulation of cell proliferation
(F) 8289: other binding
->lipid binding
(P) 9733: other biological processes
->response to auxin
miRNA/tasiRNA
Target sequence
miRNA/tasiRNA sequence
Map
5'--3'
miR165a: 3'-CCCCCTACTTCGGACCAGGCT-5'
5'--3'
miR165b: 3'-CCCCCTACTTCGGACCAGGCT-5'
5'--3'
miR166a: 3'-CCCCTTACTTCGGACCAGGCT-5'
5'--3'
miR166b: 3'-CCCCTTACTTCGGACCAGGCT-5'
5'--3'
miR166c: 3'-CCCCTTACTTCGGACCAGGCT-5'
5'--3'
miR166d: 3'-CCCCTTACTTCGGACCAGGCT-5'
5'--3'
miR166e: 3'-CCCCTTACTTCGGACCAGGCT-5'
5'--3'
miR166f: 3'-CCCCTTACTTCGGACCAGGCT-5'
5'--3'
miR166g: 3'-CCCCTTACTTCGGACCAGGCT-5'
Orthologs
Repression motif
Repression motif in putative orthologs
AVNSDELNLAL AHYAT at 102/1010 in physcomitrella Pp014242 (Type III)
VLRSYRLHLGL DLTRS at 876/1010 in physcomitrella Pp014242 (Type III)
GAHARQLDLHL TLRVS at 851/940 in sorghum Sb031905 (Type III)
VLSSYRLHLAL DLTRP at 746/880 in physcomitrella Pp026644 (Type III)
QSYHYHLGLEL LNQSD at 709/980 in sorghum Sb022478 (Type III)
Status
Plasmid construction -> done
Plasmid construction -> done
Transformed -> done
T1 seed harvested -> done
T2 seed harvested -> done
CRES-T phenotype from individual project
View all photo
sterile or low fertility (A20791),
rough surface leaf (direct input)
CRES-T phenotype from publication
CRES-T phenotype from bulk project
anther indehiscent ,
dark green leaf ,
narrow leaf ,
sterile or low fertility
(A20269-93)
hyponastic leaf ,
fragile stem
(A20269-62)
Phenotype in ornamental plants
ID
Species
Construct
Date
Comment
Phenotype
Photo
ID50098
Torenia
35S:AtCDS-SRDX
2008-10-01
development bulk, not obtained  
 
 
Comment