fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT4G36870 (BLH2, SAW1)

Alias BLH2, SAW1
TF Classification
FioreDBHD (Click to show phylogenetic tree)
RARTFHB / BELL1
AtTFDBHomeobox / BEL
PlnTFDBHB (v3.0), HB (v1.0)
DATFHB
TAIR short description SAWTOOTH 1, BEL1-like homeodomain 2 (.1.2)
TAIR annotation Encodes a member of the BEL family of homeodomain proteins. Plants doubly mutant for saw1/saw2 (blh2/blh4) have serrated leaves. BP is expressed in the serrated leaves, therefore saw1/saw2 may act redundantly to repress BP in leaves. (.1), Encodes a member of the BEL family of homeodomain proteins. Plants doubly mutant for saw1/saw2 (blh2/blh4) have serrated leaves. BP is expressed in the serrated leaves, therefore saw1/saw1 may act redundantly to repress BP in leaves. (.2)
Gene model
Gene model cDNA support
AT4G36870.1 29
AT4G36870.2 28
Entry clone (w/o stop) RE_0567_x
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: transcription,DNA-dependent ->regulation of transcription, DNA-templated
(P) 9965: developmental processes ->leaf morphogenesis
miRNA/tasiRNA
Target sequence miRNA/tasiRNA sequence Map
5'--3'

miRN4412: 3'-TTGGTAGTAGTAGTAGTAGT-5'
Orthologs
Type
Ia Ib II III Total
poplar 1 2 3
soybean 1 3 4
rice
sorghum
physcomitrella
Total 2 5 7
Repression motif 
GHGGQGLSLSLSSSLE at 238/739 in AT4G36870.1
PTGDVSLTLGLRHAGN at 712/739 in AT4G36870.1
GHGGQGLSLSLSSSLE at 238/739 in AT4G36870.2
PTGDVSLTLGLRHAGN at 712/739 in AT4G36870.2
Repression motif
in putative orthologs		 
VVEGQGLSLSLSSSLE at 155/725 in soybean Gm001830 (Type III)
TPGDVSLTLGLRHAGN at 700/725 in soybean Gm001830 (Type III)
VVEGQGLSLSLSSSLQ at 307/824 in poplar Pt037202 (Type II)
TAGDVSLTLGLRHAGN at 798/824 in poplar Pt037202 (Type II)
VVEGQGLSLSLSSSLQ at 300/825 in poplar Pt000724 (Type III)
TAGDVSLTLGLRHAGN at 799/825 in poplar Pt000724 (Type III)
VVEGQGLSLSLSSSLE at 180/705 in soybean Gm030003 (Type II)
TPGDVSLTLGLRHAGN at 679/705 in soybean Gm030003 (Type II)
VVEGQGLSLSLSSSLQ at 307/824 in poplar Pt037201 (Type III)
TAGDVSLTLGLRHAGN at 798/824 in poplar Pt037201 (Type III)
VVEGQGLSLSLSSSLE at 155/686 in soybean Gm001831 (Type III)
TPGDVSLTLGLRHAGN at 661/686 in soybean Gm001831 (Type III)
HGHGQGLSLSLSSSIE at 279/766 in soybean Gm003185 (Type III)
TTGDVSLTLGLRHAGN at 741/766 in soybean Gm003185 (Type III)
Status
Plasmid construction -> done
Plasmid construction -> done
Transformed -> done
T1 seed harvested -> done
T2 seed harvested -> done
CRES-T phenotype from individual project
abnormal flower (direct input)
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants
ID Species Construct Date Comment Phenotype Photo
ID50100 Torenia 35S:AtCDS-SRDX 2008-10-01 development bulk, not obtained      
Comment