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| Locus | Common name | Short description |
| AT1G01250 | Integrase-type DNA-binding superfamily protein (.1) |
>AT1G01250.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BfaI, BglI, BglII, BmrI, BpmI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiHKAI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspHI, BspMI, BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstF5I, BstNI, BstUI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, Cac8I, Cfr10I, ClaI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HindIII, HinfI, HpaI, HphI, HpyCH4V, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, N.BstNBI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, RsrII, SacI, SacII, SapI, Sau96I, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StyI, SwaI, TfiI, TliI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AccI | GT|[AC][TG]AC | 535 |
| AciI | C|CGC | 54, 60 |
| AflIII | A|CPuPyGT | 334 |
| AluI | AG|CT | 18, 104, 283, 288, 456, 465 |
| ApoI | Pu|AATTPy | 294 |
| BanI | G|GPyPuCC | 225 |
| BanII | GPuGCPy|C | 184 |
| BlpI | GC|TNAGC | 287 |
| BsaAI | PyAC|GTPu | 333, 525 |
| BsaJI | C|CNNGG | 135, 187 |
| BsaWI | [AT]|CCGG[AT] | 222 |
| BsiEI | CGPuPy|CG | 325 |
| Bsp1286I | G[GAT]GC[CAT]|C | 184 |
| BspT107I(HgiCI) | G|G[TC][AG]CC | 225 |
| BssKI | |CCNGG | 187 |
| BstYI | Pu|GATCPy | 214, 315 |
| BtgI | C|CPuPyGG | 135 |
| DdeI | C|TNAG | 172, 241, 286, 463 |
| DpnI | GA-CH3|TC | 175, 213, 314, 388 |
| DpnII | |GATC | 175, 213, 314, 388 |
| EaeI | Py|GGCCPu | 365 |
| EcoRV | GAT|ATC | 349 |
| Fnu4HI | GC|NGC | 82, 237, 258, 360, 372, 458 |
| HaeIII | GG|CC | 244, 364 |
| HincII | GTPy|PuAC | 535 |
| HpaII | C|CGG | 187, 221, 227, 494, 510 |
| Hpy188I | TCN|GA | 171, 178, 200, 211 |
| Hpy99I | CG[AT]CG| | 251, 428, 536 |
| HpyCH4III | ACN|GT | 326 |
| HpyCH4IV | A|CGT | 252, 332, 411, 524 |
| MboI | |GATC | 175, 213, 314, 388 |
| MseI | T|TAA | 72 |
| MslI | CAPyNN|NNPuTG | 397 |
| MspA1I | C[AC]G|C[GT]G | 289, 362 |
| MspI | C|CGG | 187, 221, 227, 494, 510 |
| MwoI | GCNNNNN|NNGC | 243, 369, 464 |
| NciI | CC|[CG]GG | 187 |
| NlaIII | CATG| | 562 |
| NlaIV | GGN|NCC | 225, 498 |
| PmlI | CAC|GTG | 333, 525 |
| PvuII | CAG|CTG | 289 |
| RsaI | GT|AC | 130, 336 |
| SalI | G|TCGAC | 535 |
| Sau3AI | |GATC | 175, 213, 314, 388 |
| ScrFI | CC|NGG | 187 |
| StuI | AGG|CCT | 245 |
| Taqƒ¿I | T|CGA | 110, 309, 322, 534 |
| TseI | G|C[AT]GC | 237, 258, 360, 372, 458 |
| Tsp45I | |GT[CG]AC | 2 |
| Tsp509I | |AATT | 293 |
| TspRI | NNCA[CG]TGNN| | 129 |
Click here to view TAIR data
>AT1G01250.1 length:579
ATGTCACCAC AGAGAATGAA GCTATCATCA CCACCAGTTA CCAACAACGA | 50 |
ACCAACCGCC ACCGCTTCTG CCGTTAAATC TTGCGGCGGA GGAGGTAAAG | 100 |
AAACCAGCTC ATCGACCACG AGGCATCCAG TGTACCACGG AGTTCGCAAA | 150 |
CGCCGATGGG GAAAATGGGT TTCTGAGATC AGAGAGCCCC GGAAAAAGTC | 200 |
TCGGATTTGG CTCGGATCTT TTCCGGTGCC GGAGATGGCT GCTAAGGCCT | 250 |
ACGACGTGGC AGCGTTTTGT CTAAAAGGTA GAAAAGCTCA GCTGAATTTC | 300 |
CCTGAAGAAA TCGAGGATCT ACCTCGACCG TCCACGTGTA CTCCCAGAGA | 350 |
TATCCAAGTC GCAGCGGCCA AAGCAGCCAA CGCCGTGAAG ATCATCAAAA | 400 |
TGGGAGATGA TGACGTGGCA GGAATAGACG ACGGAGATGA TTTCTGGGAA | 450 |
GGCATTGAGC TGCCTGAGCT TATGATGAGT GGAGGTGGGT GGTCGCCGGA | 500 |
GCCTTTTGTT GCCGGAGATG ATGCCACGTG GCTTGTCGAC GGAGACTTGT | 550 |
ATCAGTATCA GTTCATGGCG TGTCTGTGA | 600 |
>AT1G01250.1 longest ORF length:192
MSPQRMKLSS PPVTNNEPTA TASAVKSCGG GGKETSSSTT RHPVYHGVRK | 50 |
RRWGKWVSEI REPRKKSRIW LGSFPVPEMA AKAYDVAAFC LKGRKAQLNF | 100 |
PEEIEDLPRP STCTPRDIQV AAAKAANAVK IIKMGDDDVA GIDDGDDFWE | 150 |
GIELPELMMS GGGWSPEPFV AGDDATWLVD GDLYQYQFMA CL | 200 |